Parental gene:

SDAD1, ENSMMUG00000017503

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:5:53595852..53630787(+)


>ENSMMUG00000017503
ATGTCCAGCAGAAACAACAACAAGCTGCCCAGCAACCTGCCGCAGTTACAGAATCTGATCAAGCGAGACCCGCCGGCCTA
CATCGAGGAGTTTCTACAGCAGTATAATCACTACAAATCCAATGTGGAGATTTTCAAATTGCAACCAAATAAACCCAGCA
AAGAACTAGCAGAGCTGGTGATGTTTATGGCACAGATTAGTCACTGCTACCCAGAGTATCTAAGTAATTTTCCTCAAGAG
GTGAAAGATCTTCTCTCCTGCAATCATACCGTATTGGATCCAGATCTTCGAATGACATTTTGCAAAGCTTTGATCTTGCT
GAGAAATAAGAATCTCATCAATCCATCAAGCCTGCTAGAACTCTTCTTTGAACTTCTGCGTTGCCATGATAAGCTTCTGC
GAAAGACTTTATACACACATATTGTGACTGATATCAAGAATATAAACGCAAAACACAAGAACAATAAAGTGAATGTAGTA
TTGCAAAATTTCATGTACACCATGTTAAGAGATAGCAATGCAACCGCAGCCAAGATGTCTTTAGATGTAATGATTGAACT
CTACAGAAGGAACATCTGGAATGATGCCAAAACTGTCAATGTTATCACAACTGCATGTTTCTCTAAGGTCACCAAGATAT
TAGTTGCCGCTTTGACATTCTTTCTTGGGAAAGATGAAGAAGAAAAACAGGACAGTGACTCTGAATCTGAGGATGATGGA
CCAACAGCAAGAGACCTGCTAGTACAATATGCTACAGGGAAGAAAAGTTCCAAAAACAAGAAAAAGTTGGAAAAGGCAAT
GAAAGTGCTCAAGAAACAAAAAAAGAAGAAAAAACCAGAGGTGTTTAACTTTTCAGCCATTCACTTGATTCATGATCCCC
AAGATTTTGCAGAAAAACTACTAAAGCAGCTTGAGTGCTGTAAGGAGAGGTTTGAAGTAAAGATGATGCTCATGAACCTC
ATCTCCAGATTGGTGGGAATTCATGAGCTCTTCCTCTTCAATTTCTATCCCTTTTTGCAAAGGTTTCTGCAGCCCCACCA
AAGAGAAGTAACAAAGATCCTTCTGTTTGCTGCACAAGCGTCTCATCACCTAGTACCCCCAGAGATTATTCAGTCATTGC
TTATGACTGTGGCAAACAATTTTGTTACCGACAAGAACTCTGGAGAAGTCATGACAGTAGGAATCAATGCTATAAAAGAG
ATAACAGCTCGATGTCCTCTGGCCATGACTGAAGAACTTCTCCAAGACCTGGCTCAGTATAAAACACACAAGGATAAGAA
TGTAATGATGTCTGCTAGAACTTTGATTCAGCTCTTCCGAACACTGAATCCTCAGATGCTGCAGAAGAAATTCCGGGGTA
AGCCTACAGAGGCCTCCATGGAAGCAAGAGTGCAAGAATATGGAGAATTAGATGCTAAAGATTACATTCCAGGAGCAGAA
GTTCTGGAAGTTGAGAAAGAAGAGAATGCTGAAAATGATGAAGATGGATGGGAAAGTACCAGTCTCAGTGAGGAGGAAGA
GGATGCTGATGGTGAATGGATTGATGTGCAACACTCTTCCGATGAAGAACAGCAAGAAATCTCCAAGAAGCTGAATAGCA
TGCCCATGGAGGAGCGGAAAGCCAAAGCTGCAGCCGTCAGCACCAGCCGAGTTTTAACTCAGGAAGACTTCCAGAAAATC
CGCATGGCCCAAATGAGAAAAGAACTTGATGCTGCCCCTGGGAAATCCCAGAAGAGGAAATACCTTGAAATAGACAGTGA
TGAAGAGCCCAGGGGTGAATTACTTTCTCTTCGGGACATTGAACGCCTTCATAAAAAGCCAAAGTCTGACAAAGAGACAA
GACTAGCAACTGCAATGGCTGGAAAGACAGACCGAAAAGAATTTGCGAGGAAGAAAACCAAAATGAATCCATTTTCTAGT
TCGACAAATAAAGAGAAGAAAAAACAGAAGAACTTTATGATGATGCGGTATAGCCAGAATGTCCGGTCAAAACATAAGCG
TTCCTTCCGAGAAAAACAGTTGGCACTAAGAGATGCACTTTTG

Library Parental gene expression (RPM)
SRP007412_brain 28 .46 RPM
SRP007412_brain_prefrontal_cortex 19 .99 RPM
SRP007412_cerebellum 17 .69 RPM
SRP007412_heart 7 .66 RPM
SRP007412_kidney 18 .19 RPM
SRP007412_liver 5 .42 RPM
SRP007412_testis 44 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008521 possible_ortholog 2 retrogenes
retro_cfam_1211, retro_cfam_515,
Cavia porcellus ENSCPOG00000008524 ortholog_one2many 2 retrogenes
retro_cpor_510, retro_cpor_994,
Echinops telfairi ENSETEG00000004811 possible_ortholog 2 retrogenes
retro_etel_1946, retro_etel_779,
Homo sapiens ENSG00000198301 ortholog_one2one 2 retrogenes
retro_hsap_2412, retro_hsap_4030,
Gorilla gorilla ENSGGOG00000006441 ortholog_one2one 1 retrogene
retro_ggor_1498,
Loxodonta africana ENSLAFG00000012217 possible_ortholog 1 retrogene
retro_lafr_980,
Microcebus murinus ENSMICG00000006682 possible_ortholog 1 retrogene
retro_mmur_1204,
Nomascus leucogenys ENSNLEG00000027034 ortholog_one2many 1 retrogene
retro_nleu_2410,
Oryctolagus cuniculus ENSOCUG00000026953 ortholog_one2many 1 retrogene
retro_ocun_547,
Pongo abelii ENSPPYG00000014852 ortholog_one2one 1 retrogene
retro_pabe_1777,
Pan troglodytes ENSPTRG00000024399 ortholog_one2one 2 retrogenes
retro_ptro_1388, retro_ptro_2732,
Rattus norvegicus ENSRNOG00000022229 ortholog_one2many 2 retrogenes
retro_rnor_1381, retro_rnor_1967,
Sus scrofa ENSSSCG00000008974 possible_ortholog 1 retrogene
retro_sscr_571,
Tupaia belangeri ENSTBEG00000005270 ortholog_one2many 1 retrogene
retro_tbel_2414,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_604 89.11 57.56
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Download FASTA sequences of all ENSMMUG00000017503 retrocopies