Parental gene:

UBE2C, ENSLAFG00000003164

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_19:45234299..45237366(+)


>ENSLAFG00000003164
ATGGCTTCCCAGAACCGCGACCCAGCCGCAGCCAGCGTCGTCGCCGCCCGGAAAGGGACTGAGCCCAGCGGAGGCGCCGC
CCGGGGCTCCGTGGGCAAGAGGCTACAGCAGGAGTTGATGACCCTCATGATGTCTGGTGACAAAGGAATTTCTGCCTTCC
CTGAATCAGACAACCTTTTCAAGTGGGTGGGGACCATCCACGGAGCAGCTGGCACAGTATATGAAGACCTGAGGTATAAG
CTGTCTCTTGAGTTCCCCAGTGGCTACCCTTACAATGCACCCACGGTGAAGTTCCTCACACCCTGCTACCACCCCAACGT
GGACACTCAGGGTAACATCTGCCTAGACATCCTGAAGGACAAGTGGTCTGCCCTGTATGATGTCAGGACCATCCTCCTCT
CTATCCAGAGCCTGCTGGGAGCCACAGAACCCAACATCGATAGCCCTTTAAACACACATGCTGCCGAGCTCTGGAAAAAC
CCCACAGCCTTTAAGAAGTACCTGCAGGAAACCTACTCAAAGCAAGTCTCCAGCCAAGAGCCCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012547 ortholog_one2one 5 retrogenes
retro_amel_1122, retro_amel_1353, retro_amel_157, retro_amel_1621, retro_amel_635,
Bos taurus ENSBTAG00000016746 possible_ortholog 1 retrogene
retro_btau_249,
Canis familiaris ENSCAFG00000009745 possible_ortholog 6 retrogenes
retro_cfam_1031, retro_cfam_1805, retro_cfam_1878, retro_cfam_2078, retro_cfam_290, retro_cfam_356,
Choloepus hoffmanni ENSCHOG00000005054 possible_ortholog 1 retrogene
retro_chof_902,
Equus caballus ENSECAG00000014619 possible_ortholog 2 retrogenes
retro_ecab_297, retro_ecab_316,
Erinaceus europaeus ENSEEUG00000010643 possible_ortholog 14 retrogenes
retro_eeur_113, retro_eeur_177, retro_eeur_249, retro_eeur_253, retro_eeur_266, retro_eeur_272, retro_eeur_294, retro_eeur_346, retro_eeur_375, retro_eeur_518, retro_eeur_592, retro_eeur_604, retro_eeur_641, retro_eeur_80,
Echinops telfairi ENSETEG00000012346 possible_ortholog 18 retrogenes
retro_etel_1212, retro_etel_1500, retro_etel_1560, retro_etel_157, retro_etel_1634, retro_etel_1729, retro_etel_1853, retro_etel_1856, retro_etel_2013, retro_etel_221, retro_etel_321, retro_etel_324, retro_etel_400, retro_etel_628, retro_etel_689, retro_etel_764, retro_etel_824, retro_etel_909,
Felis catus ENSFCAG00000001885 possible_ortholog 4 retrogenes
retro_fcat_1440, retro_fcat_1530, retro_fcat_1667, retro_fcat_1734,
Macropus eugenii ENSMEUG00000007177 ortholog_one2many 14 retrogenes
retro_meug_1021, retro_meug_1128, retro_meug_1203, retro_meug_1398, retro_meug_1435, retro_meug_145, retro_meug_1476, retro_meug_1504, retro_meug_1575, retro_meug_1773, retro_meug_1808, retro_meug_2034, retro_meug_334, retro_meug_645,
Microcebus murinus ENSMICG00000011218 possible_ortholog 2 retrogenes
retro_mmur_332, retro_mmur_988,
Macaca mulatta ENSMMUG00000021023 ortholog_one2one 4 retrogenes
retro_mmul_1345, retro_mmul_170, retro_mmul_1951, retro_mmul_777,
Monodelphis domestica ENSMODG00000013661 ortholog_one2many 6 retrogenes
retro_mdom_1549, retro_mdom_1552, retro_mdom_1732, retro_mdom_1970, retro_mdom_2020, retro_mdom_415,
Mustela putorius furo ENSMPUG00000017619 ortholog_one2one 2 retrogenes
retro_mputfur_103, retro_mputfur_189,
Oryctolagus cuniculus ENSOCUG00000012176 possible_ortholog 3 retrogenes
retro_ocun_1005, retro_ocun_1294, retro_ocun_348,
Otolemur garnettii ENSOGAG00000004989 ortholog_one2one 3 retrogenes
retro_ogar_2347, retro_ogar_249, retro_ogar_3067,
Pan troglodytes ENSPTRG00000013564 possible_ortholog 1 retrogene
retro_ptro_38,
Sarcophilus harrisii ENSSHAG00000002117 possible_ortholog 1 retrogene
retro_shar_832,
Sus scrofa ENSSSCG00000007423 possible_ortholog 1 retrogene
retro_sscr_643,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_73 96.13 100.00
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Download FASTA sequences of all ENSLAFG00000003164 retrocopies