Parental gene:

KPNA2, ENSGGOG00000027535

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:15497662..15510186(-)


>ENSGGOG00000027535
ATGTCCACCAACGAGAATGCTAATACACCAGCTGCCCGTCTTCACAGATTCAAGAACAAGGGAAAAGACAGTACAGAAAT
GAGGCGTCGCAGAATAGAGGTCAATGTGGAGCTGAGGAAAGCTAAGAAGGATGACCAGATGCTGAAGAGGAGAAATGTAA
GCTCATTTCCTGATGATGCTACTTCTCCGCTGCAGGAAAACCGCAACAACCAGGGCACTGTAAATTGGTCGGTTGATGAC
ATTGTCAAAGGCATAAATAGCAGCAATGTGGAAAATCAGCTCCAAGCTACTCAAGCTGCCAGGAAACTACTTTCCAGAGA
AAAACAGCCCCCCATAGACAACATAATCCGGGCTGGTTTGATTCCGAAATTTGTGTCCTTCTTGGGCAGAACTGATTGTA
GTCCCATTCAGTTTGAATCTGCTTGGGCACTCACTAACATTGCTTCTGGGACATCAGAACAAACCAAGGCTGTGGTAGAT
GGAGGTGCCATCCCAGCATTCATTTCTCTGTTGGCATCTCCCCATGCTCACATCAGTGAACAAGCTGTCTGGGCTCTAGG
AAACATTGCAGGTGATGGCTCGGTGTTCCGAGACTTGGTTATTAAGTACGGTGCAGTTGACCCACTGTTGGCTCTCCTTG
CAGTTCCTGATATGTCATCTTTAGCATGTGGCTACTTACGTAATCTTACCTGGACACTTTCTAATCTTTGCCGCAACAAG
AATCCTGCACCCCCGATAGATGCTGTTGAGCAGATTCTTCCTACCTTAGTTCGGCTCCTGCATCATGATGATCCAGAAGT
ATTAGCAGATACCTGCTGGGCTATTTCCTACCTTACTGATGGTCCAAATGAACGAATTGGCATGGTCGTGAAAACAGGAG
TTGTGCCCCAACTTGTGAAGCTTCTAGGAGCTTCTGAATTGCCAATTGTGACTCCTGCCCTAAGAGCCATAGGGAATATC
GTCACTGGTACAGATGAACAGACTCAGGTTTTGATTGATGCAGGAGCACTCGCCGTCTTTCCCAGCCTGCTCACCAACCC
CAAAACTAACATTCAGAAGGAAGCTACGTGGACAATGTCAAACATCACAGCCAGCCAGGACCAGATACAGCAAGTTGTGA
ATCACGGATTAGTCCCATTCCTTGTCAGCGTTCTCTCTAAGGCAGATTTTAAGACACAAAAGGAAGCTGTGTGGGCGGTG
ACCAACTATACCAGTGGCGGAACAGTTGAACAGATTGTGTACCTTGTTCACTGTGGCATAATAGAACCGTTGGTGAACCT
CTTAACTGCAAAAGATACCAAGATAATTCTGGTTATCCTGGATGCCATTTCAAATATCTTTCAGGCTGCTGAGAAACTAG
GTGAAACTGAGAAACTTAGTATAATGATTGAAGAATGTGGAGGCTTAGACAAAATTGAAGCTCTACAAAACCATGAAAAT
GAGTCTGTGTATAAGGCTTCGTTAAGCTTAATTGAGAAGTATTTCTCTGTAGAGGAAGAGGAAGATCAAAACGTTGTGCC
AGAAACTACCTCTGAAGGCTACACCTTCCAAGTTCAGGATGGGGTTCCTGGGACATTTAACTTTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 22 .06 RPM
SRP007412_cerebellum 7 .49 RPM
SRP007412_heart 2 .66 RPM
SRP007412_kidney 13 .82 RPM
SRP007412_liver 4 .54 RPM
SRP007412_testis 215 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018411 possible_ortholog 3 retrogenes
retro_amel_1161, retro_amel_1318, retro_amel_440,
Canis familiaris ENSCAFG00000011598 possible_ortholog 2 retrogenes
retro_cfam_648, retro_cfam_90,
Cavia porcellus ENSCPOG00000026318 ortholog_one2many 1 retrogene
retro_cpor_46,
Dasypus novemcinctus ENSDNOG00000019151 possible_ortholog 6 retrogenes
retro_dnov_1184, retro_dnov_1811, retro_dnov_2161, retro_dnov_2279, retro_dnov_379, retro_dnov_693,
Echinops telfairi ENSETEG00000004445 ortholog_one2one 2 retrogenes
retro_etel_346, retro_etel_347,
Felis catus ENSFCAG00000001936 ortholog_one2one 2 retrogenes
retro_fcat_1176, retro_fcat_921,
Homo sapiens ENSG00000182481 ortholog_one2one 1 retrogene
retro_hsap_2950,
Myotis lucifugus ENSMLUG00000027946 ortholog_one2many 7 retrogenes
retro_mluc_1034, retro_mluc_1258, retro_mluc_1414, retro_mluc_288, retro_mluc_50, retro_mluc_52, retro_mluc_993,
Macaca mulatta ENSMMUG00000018256 ortholog_one2one 3 retrogenes
retro_mmul_1140, retro_mmul_1635, retro_mmul_1947,
Monodelphis domestica ENSMODG00000003897 ortholog_one2many 1 retrogene
retro_mdom_271,
Mus musculus ENSMUSG00000018362 ortholog_one2many 1 retrogene
retro_mmus_229,
Nomascus leucogenys ENSNLEG00000001749 ortholog_one2one 3 retrogenes
retro_nleu_1052, retro_nleu_1634, retro_nleu_208,
Otolemur garnettii ENSOGAG00000027672 possible_ortholog 7 retrogenes
retro_ogar_1044, retro_ogar_1142, retro_ogar_1757, retro_ogar_2008, retro_ogar_464, retro_ogar_477, retro_ogar_936,
Pongo abelii ENSPPYG00000008569 possible_ortholog 1 retrogene
retro_pabe_3501,
Pteropus vampyrus ENSPVAG00000004976 ortholog_one2one 2 retrogenes
retro_pvam_1321, retro_pvam_1333,
Rattus norvegicus ENSRNOG00000015329 ortholog_one2many 1 retrogene
retro_rnor_42,
Sarcophilus harrisii ENSSHAG00000011391 ortholog_one2one 1 retrogene
retro_shar_165,
Vicugna pacos ENSVPAG00000001855 ortholog_one2one 3 retrogenes
retro_vpac_124, retro_vpac_162, retro_vpac_163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2044 85.12 100.00
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2. retro_ggor_2609 81.82 57.77
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Download FASTA sequences of all ENSGGOG00000027535 retrocopies