Parental gene:

TCEA1, ENSGGOG00000023652

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:8:51860150..51917547(-)


>ENSGGOG00000023652
GCCATGGAGGACGAAGTGGTCCGCTTTGCCAAGAAGATGGACAAGATGGTGCAGAAGAAGAACGCGGCTGGAGCATTGGA
TTTGCTAAAGGAGCTTAAGAATATTCCTATGACCCTGGAATTACTGCAGTCCACAAGAATCGGAATGTCAGTTAATGCTA
TTCGCAAGCAGAGTACAGATGAGGAAGTTACATCTTTGGCAAAGTCTCTCATCAAATCCTGGAAAAAATTACTAGATGGG
CCATCAACTGAGAAAGACCTTGACGAAAAGAAGAAAGAACCTGCAATTACATCGCAGAACAGCCCTGAGGCAAGAGAAGA
AAGTACTTCCAGCGGCAATGTAAGCAACAGAAAGGATGAGACAAATGCTCGAGATACTTATGTTTCATCTTTTCCTCGGG
CACCAAGCACTTCTGATTCTGTGCGGTTGAAGTGTAGGGAGATGCTTGCTGCAGCTCTTCGAACAGGGGATGACTACATT
GCAATTGGAGCTGATGAGGAAGAATTAGGATCTCAAATTGAAGAAGACCTGGTACCAATATATCAAGAAATAAGGAATAC
AGACATGAAATACAAAAATAGAGTACGAAGTAGGATATCAAATCTTAAAGACGCAAAAAATCCAAATTTAAGGAAAAATG
TCCTCTGTGGGAATATTCCTCCTGACTTATTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTGAAAGAGATG
CGGAAAAACTTGACCAAAGAAGCCATCAGAGAGCATCAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTCACATG
TGGCAAATGTAAAAAGAAGAATTGCACTTACACACAGGTACAAACCCGTAGTGCTGATGAACCAATGACAACATTTGTTG
TCTGTAATGAATGTGGAAATCGATGGAAGATATGC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 35 .77 RPM
SRP007412_cerebellum 43 .14 RPM
SRP007412_heart 8 .35 RPM
SRP007412_kidney 54 .14 RPM
SRP007412_liver 58 .24 RPM
SRP007412_testis 87 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001247 ortholog_one2one 1 retrogene
retro_chof_458,
Callithrix jacchus ENSCJAG00000014407 ortholog_one2one 1 retrogene
retro_cjac_2095,
Dasypus novemcinctus ENSDNOG00000013799 ortholog_one2one 4 retrogenes
retro_dnov_1315, retro_dnov_1853, retro_dnov_839, retro_dnov_952,
Erinaceus europaeus ENSEEUG00000009220 ortholog_one2one 1 retrogene
retro_eeur_73,
Homo sapiens ENSG00000187735 ortholog_one2one 4 retrogenes
retro_hsap_2634, retro_hsap_4159, retro_hsap_4200, retro_hsap_4243,
Macaca mulatta ENSMMUG00000016022 ortholog_one2one 1 retrogene
retro_mmul_1146,
Mus musculus ENSMUSG00000033813 ortholog_one2one 2 retrogenes
retro_mmus_1369, retro_mmus_3559,
Nomascus leucogenys ENSNLEG00000000981 ortholog_one2one 3 retrogenes
retro_nleu_1028, retro_nleu_1374, retro_nleu_1384,
Oryctolagus cuniculus ENSOCUG00000007474 ortholog_one2many 3 retrogenes
retro_ocun_1382, retro_ocun_401, retro_ocun_852,
Pongo abelii ENSPPYG00000018589 ortholog_one2one 3 retrogenes
retro_pabe_3395, retro_pabe_3436, retro_pabe_3455,
Pan troglodytes ENSPTRG00000020251 ortholog_one2one 2 retrogenes
retro_ptro_2851, retro_ptro_2884,
Rattus norvegicus ENSRNOG00000022323 ortholog_one2many 1 retrogene
retro_rnor_1089,
Sarcophilus harrisii ENSSHAG00000013661 ortholog_one2many 1 retrogene
retro_shar_50,
Ictidomys tridecemlineatus ENSSTOG00000021179 ortholog_one2one 1 retrogene
retro_itri_1745,
Tarsius syrichta ENSTSYG00000001030 ortholog_one2one 1 retrogene
retro_tsyr_1624,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2794 78.77 59.14
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2. retro_ggor_2814 75.76 65.45
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3. retro_ggor_2844 70.85 65.45
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Download FASTA sequences of all ENSGGOG00000023652 retrocopies