Parental gene:

TCEA1, ENSG00000187735

Aliases:TCEA1, GTF2S, SII, TCEA, TF2S, TFIIS
Description:transcription elongation factor A (SII), 1 [Source:HGNC Symbol;Acc:11612]
Organism:Human (Homo sapiens)
Coordinates:8:54879111..54935089(-)


>ENSG00000187735
ATGGAGGACGAAGTGGTCCGCTTTGCCAAGAAGATGGACAAGATGGTGCAGAAGAAGAACGCGGCTGGAGCATTGGATTT
GCTAAAGGAGCTTAAGAATATTCCTATGACCCTGGAATTACTGCAGTCCACAAGAATCGGAATGTCAGTTAATGCTATTC
GCAAGCAGAGTACAGATGAGGAAGTTACATCTTTGGCAAAGTCTCTCATCAAATCCTGGAAAAAATTATTAGATGGGCCA
TCAACTGAGAAAGACCTTGACGAAAAGAAGAAAGAACCTGCAATTACATCGCAGAACAGCCCTGAGGCAAGAGAAGAAAG
TACTTCCAGCGGCAATGTAAGCAACAGAAAGGATGAGACAAATGCTCGAGATACTTATGTTTCATCCTTTCCTCGGGCAC
CAAGCACTTCTGATTCTGTGCGGTTGAAGTGTAGGGAGATGCTTGCTGCAGCTCTTCGAACAGGGGATGACTACATTGCA
ATTGGAGCTGATGAGGAAGAATTAGGATCTCAAATTGAAGAAGCTATATATCAAGAAATAAGGAATACAGACATGAAATA
CAAAAATAGAGTACGAAGTAGGATATCAAATCTTAAAGATGCAAAAAATCCAAATTTAAGGAAAAATGTCCTCTGTGGGA
ATATTCCTCCTGACTTATTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTGAAAGAGATGCGGAAAAACTTG
ACCAAAGAAGCCATCAGAGAGCATCAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTCACATGTGGCAAATGTAA
AAAGAAGAATTGCACTTACACACAGGTACAAACCCGTAGTGCTGATGAACCAATGACAACATTTGTTGTCTGTAATGAAT
GTGGAAATCGATGGAAGTTCTGTTGA

Library Parental gene expression (RPM)
bodymap2_adipose 81 .32 RPM
bodymap2_adrenal 81 .04 RPM
bodymap2_brain 60 .99 RPM
bodymap2_breast 80 .55 RPM
bodymap2_colon 101 .17 RPM
bodymap2_heart 31 .18 RPM
bodymap2_kidney 61 .61 RPM
bodymap2_liver 41 .17 RPM
bodymap2_lung 55 .47 RPM
bodymap2_lymph_node 69 .71 RPM
bodymap2_ovary 97 .04 RPM
bodymap2_prostate 108 .44 RPM
bodymap2_skeletal_muscle 64 .33 RPM
bodymap2_testis 86 .48 RPM
bodymap2_thyroid 108 .83 RPM
bodymap2_white_blood_cells 84 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001247 ortholog_one2one 1 retrogene
retro_chof_458,
Callithrix jacchus ENSCJAG00000014407 ortholog_one2one 1 retrogene
retro_cjac_2095,
Dasypus novemcinctus ENSDNOG00000013799 ortholog_one2one 4 retrogenes
retro_dnov_1315, retro_dnov_1853, retro_dnov_839, retro_dnov_952,
Erinaceus europaeus ENSEEUG00000009220 ortholog_one2one 1 retrogene
retro_eeur_73,
Gorilla gorilla ENSGGOG00000023652 ortholog_one2one 3 retrogenes
retro_ggor_2794, retro_ggor_2814, retro_ggor_2844,
Macaca mulatta ENSMMUG00000016022 ortholog_one2one 1 retrogene
retro_mmul_1146,
Mus musculus ENSMUSG00000033813 ortholog_one2one 2 retrogenes
retro_mmus_1369, retro_mmus_3559,
Nomascus leucogenys ENSNLEG00000000981 ortholog_one2one 3 retrogenes
retro_nleu_1028, retro_nleu_1374, retro_nleu_1384,
Oryctolagus cuniculus ENSOCUG00000007474 ortholog_one2many 3 retrogenes
retro_ocun_1382, retro_ocun_401, retro_ocun_852,
Pongo abelii ENSPPYG00000018589 ortholog_one2one 3 retrogenes
retro_pabe_3395, retro_pabe_3436, retro_pabe_3455,
Pan troglodytes ENSPTRG00000020251 ortholog_one2one 2 retrogenes
retro_ptro_2851, retro_ptro_2884,
Rattus norvegicus ENSRNOG00000022323 ortholog_one2many 1 retrogene
retro_rnor_1089,
Sarcophilus harrisii ENSSHAG00000013661 ortholog_one2many 1 retrogene
retro_shar_50,
Ictidomys tridecemlineatus ENSSTOG00000021179 ortholog_one2one 1 retrogene
retro_itri_1745,
Tarsius syrichta ENSTSYG00000001030 ortholog_one2one 1 retrogene
retro_tsyr_1624,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2634 99.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_4159 77.09 63.57
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_hsap_4200 76.26 65.45
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_hsap_4243 66.16 86.71
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000187735 retrocopies