Parental gene:

ENSG00000143977, ENSGGOG00000022169

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:2a:71591810..71647001(-)


>ENSGGOG00000022169
CCTCCTGAGGTGAAGAAATTTATGGACAAGAAGTTATCATTGAAGTTAAATGGTGGCAGACATGTCCAAGGAATATTGCG
GGGATTTGATCCCTTTATGAACCTTGTGATAGATGAATGTGTGGAGATGGCGACTAGTGGACAACAGAACAATATTGGAA
TGGTGGACAACATACCTAATAAAGCGGTAAGCCCAAAGTTCTTGAAAAAGGTGAACCAAAAAGGACAACTTACTTTTAGC
AAATTATTAAGCATAAAGACCTCCAAGGAGTGG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .05 RPM
SRP007412_cerebellum 1 .22 RPM
SRP007412_heart 1 .34 RPM
SRP007412_kidney 3 .15 RPM
SRP007412_liver 1 .45 RPM
SRP007412_testis 3 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016000 ortholog_one2one 9 retrogenes
retro_amel_1577, retro_amel_1618, retro_amel_1671, retro_amel_1795, retro_amel_186, retro_amel_466, retro_amel_563, retro_amel_747, retro_amel_944,
Callithrix jacchus ENSCJAG00000019313 ortholog_one2one 18 retrogenes
retro_cjac_1034, retro_cjac_1227, retro_cjac_1398, retro_cjac_149, retro_cjac_1897, retro_cjac_223, retro_cjac_2419, retro_cjac_2431, retro_cjac_2658, retro_cjac_2795, retro_cjac_3246, retro_cjac_3314, retro_cjac_4078, retro_cjac_547, retro_cjac_763, retro_cjac_796, retro_cjac_897, retro_cjac_998,
Dipodomys ordii ENSDORG00000005623 ortholog_one2one 2 retrogenes
retro_dord_253, retro_dord_483,
Felis catus ENSFCAG00000008118 possible_ortholog 8 retrogenes
retro_fcat_1006, retro_fcat_1092, retro_fcat_1248, retro_fcat_1467, retro_fcat_1893, retro_fcat_562, retro_fcat_82, retro_fcat_90,
Loxodonta africana ENSLAFG00000002301 ortholog_one2one 3 retrogenes
retro_lafr_428, retro_lafr_559, retro_lafr_887,
Microcebus murinus ENSMICG00000015369 possible_ortholog 10 retrogenes
retro_mmur_1419, retro_mmur_1468, retro_mmur_1550, retro_mmur_265, retro_mmur_395, retro_mmur_59, retro_mmur_595, retro_mmur_625, retro_mmur_735, retro_mmur_901,
Myotis lucifugus ENSMLUG00000026490 possible_ortholog 3 retrogenes
retro_mluc_273, retro_mluc_46, retro_mluc_731,
Macaca mulatta ENSMMUG00000007961 possible_ortholog 3 retrogenes
retro_mmul_1021, retro_mmul_2048, retro_mmul_300,
Monodelphis domestica ENSMODG00000011528 ortholog_one2one 1 retrogene
retro_mdom_1945,
Mustela putorius furo ENSMPUG00000007221 possible_ortholog 2 retrogenes
retro_mputfur_100, retro_mputfur_114,
Nomascus leucogenys ENSNLEG00000010182 possible_ortholog 1 retrogene
retro_nleu_93,
Oryctolagus cuniculus ENSOCUG00000011214 ortholog_one2one 2 retrogenes
retro_ocun_1032, retro_ocun_57,
Ochotona princeps ENSOPRG00000001093 ortholog_one2one 6 retrogenes
retro_opri_290, retro_opri_330, retro_opri_596, retro_opri_599, retro_opri_757, retro_opri_823,
Pongo abelii ENSPPYG00000012324 possible_ortholog 14 retrogenes
retro_pabe_1054, retro_pabe_1078, retro_pabe_1079, retro_pabe_1169, retro_pabe_1188, retro_pabe_1465, retro_pabe_1603, retro_pabe_1728, retro_pabe_1929, retro_pabe_2041, retro_pabe_2160, retro_pabe_3093, retro_pabe_495, retro_pabe_95,
Rattus norvegicus ENSRNOG00000016507 possible_ortholog 1 retrogene
retro_rnor_409,
Ictidomys tridecemlineatus ENSSTOG00000008654 possible_ortholog 11 retrogenes
retro_itri_1116, retro_itri_1260, retro_itri_128, retro_itri_1395, retro_itri_1871, retro_itri_280, retro_itri_353, retro_itri_572, retro_itri_589, retro_itri_910, retro_itri_947,
Tupaia belangeri ENSTBEG00000017381 possible_ortholog 66 retrogenes
retro_tbel_1010, retro_tbel_1076, retro_tbel_1114, retro_tbel_1133, retro_tbel_1161, retro_tbel_1164, retro_tbel_1174, retro_tbel_121, retro_tbel_1288, retro_tbel_1448, retro_tbel_1461, retro_tbel_147, retro_tbel_1478, retro_tbel_149, retro_tbel_164, retro_tbel_1654, retro_tbel_1887, retro_tbel_1939, retro_tbel_1944, retro_tbel_1965, retro_tbel_1966, retro_tbel_1997, retro_tbel_2001, retro_tbel_2143, retro_tbel_217, retro_tbel_236, retro_tbel_239, retro_tbel_241, retro_tbel_2454, retro_tbel_2462, retro_tbel_2572, retro_tbel_2664, retro_tbel_2941, retro_tbel_3098, retro_tbel_3379, retro_tbel_3385, retro_tbel_343, retro_tbel_347, retro_tbel_3495, retro_tbel_3559, retro_tbel_3603, retro_tbel_362, retro_tbel_3699, retro_tbel_3980, retro_tbel_3981, retro_tbel_3983, retro_tbel_4010, retro_tbel_4011, retro_tbel_4177, retro_tbel_4196, retro_tbel_43, retro_tbel_4399, retro_tbel_4442, retro_tbel_4505, retro_tbel_4549, retro_tbel_4609, retro_tbel_465, retro_tbel_489, retro_tbel_697, retro_tbel_726, retro_tbel_736, retro_tbel_805, retro_tbel_921, retro_tbel_93, retro_tbel_936, retro_tbel_947,
Vicugna pacos ENSVPAG00000007452 possible_ortholog 10 retrogenes
retro_vpac_182, retro_vpac_196, retro_vpac_25, retro_vpac_290, retro_vpac_295, retro_vpac_352, retro_vpac_42, retro_vpac_59, retro_vpac_591, retro_vpac_641,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_664 62.32 75.82
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2. retro_ggor_1413 80.28 78.02
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3. retro_ggor_1672 68.06 78.02
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Download FASTA sequences of all ENSGGOG00000022169 retrocopies