Parental gene:

ATG12, ENSGGOG00000016888

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:98932072..98942290(-)


>ENSGGOG00000016888
ATGACTAGCCGGGAACACCAAGTTTCACTGTGTAATTGCGTCCCCCTACTCCGGCGCCTCCTTTGCGACGCTCCCTGGAG
AAAAGCACGCCCACTGCACGCGCTCAGTCGCTACTTCCGCTCTGTCTTCCCAAGCAAGATGGCGGAGGAGTCGCAGTCTG
TGTTGCAGCTTCCTCCCTCAAGTGCTGCTGGAGGGGAAGGACTTACGGATGTCTCCCCAGAAACAACCACCCCGGAGCCC
CCATCTTCCGCTGCAGTTTCCCCGGGAACAGAGGAACCTGCTGGCGACACCAAGAAAAAAATTGACATTTTGCTAAAGGC
TGTGGGAGACACTCCTATTATGAAAACAAAGAAGTGGGCAGTAGAGCGAACACGAACCATCCAAGGACTCATTGACTTCA
TCAAAAAGTTTCTTAAACTTGTGGCCTCAGAACAGTTGTTTATTTATGTGAATCAGTCCTTTGCTCCTTCCCCAGACCAA
GAAGTTGGAACTCTCTATGAGTGTTTTGGCAGTGATGGAAAACTGGTTTTACATTACTGCAAGTCTCAGGCGTGGGGATG
A

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .61 RPM
SRP007412_cerebellum 4 .92 RPM
SRP007412_heart 1 .25 RPM
SRP007412_kidney 4 .70 RPM
SRP007412_liver 5 .35 RPM
SRP007412_testis 12 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004464 ortholog_one2one 1 retrogene
retro_chof_1745,
Cavia porcellus ENSCPOG00000007187 ortholog_one2one 2 retrogenes
retro_cpor_865, retro_cpor_944,
Equus caballus ENSECAG00000012452 ortholog_one2one 1 retrogene
retro_ecab_883,
Echinops telfairi ENSETEG00000018837 ortholog_one2one 1 retrogene
retro_etel_1721,
Homo sapiens ENSG00000145782 ortholog_one2one 1 retrogene
retro_hsap_1860,
Loxodonta africana ENSLAFG00000015307 ortholog_one2one 1 retrogene
retro_lafr_450,
Myotis lucifugus ENSMLUG00000002759 ortholog_one2one 1 retrogene
retro_mluc_2259,
Pongo abelii ENSPPYG00000015699 ortholog_one2one 3 retrogenes
retro_pabe_1518, retro_pabe_1519, retro_pabe_2158,
Pan troglodytes ENSPTRG00000017154 ortholog_one2one 2 retrogenes
retro_ptro_1240, retro_ptro_1748,
Rattus norvegicus ENSRNOG00000000157 ortholog_one2one 1 retrogene
retro_rnor_2811,
Ictidomys tridecemlineatus ENSSTOG00000011755 ortholog_one2many 1 retrogene
retro_itri_156,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1814 53.52 73.66
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2. retro_ggor_2150 93.10 77.96
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Download FASTA sequences of all ENSGGOG00000016888 retrocopies