Parental gene:

Atg12, ENSRNOG00000000157

Aliases:Atg12, Apg12l
Description:Ubiquitin-like protein ATG12 [Source:UniProtKB/Swiss-Prot;Acc:Q2TBJ5]
Organism:Rat (Rattus norvegicus)
Coordinates:18:40367826..40378153(-)


>ENSRNOG00000000157
ATGGCAGAAGACCCAGAGGCTGTGCTGCAGCTCCCCGCGGCTCCGGCTGCTGCGGCGGGCGAGAGCCTTTTGGAGCTCTC
CCCAGAAACAGCCATCCCAGAGCCCCCGTCTTCGGTTGCAGTTTCGCCCGGTACGGAGGAACCTCCCGGAGACACCAAGA
AAAAAATTGACATCCTGCTGAAGGCTGTAGGAGACACTCCCATAATGAAAACGAAGAAATGGGCTGTGGAGCGGACCCGG
ACTGTCCAAGCACTCATCGACTTCATCAGAAAATTCCTCAGACTGCTGGCCTCGGAGCAGTTGTTTATTTATGTGAATCA
GTCCTTTGCCCCTTCCCCAGACCAAGAAGTTGGGACTCTATATGAGTGTTTTGGCAGTGATGGTAAACTGGTCCTACATT
ACTGCAAATCACAGGCATGGGGATGA

Library Parental gene expression (RPM)
SRP017611_brain 56 .94 RPM
SRP017611_kidney 43 .06 RPM
SRP017611_liver 22 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004464 ortholog_one2one 1 retrogene
retro_chof_1745,
Cavia porcellus ENSCPOG00000007187 ortholog_one2one 2 retrogenes
retro_cpor_865, retro_cpor_944,
Equus caballus ENSECAG00000012452 ortholog_one2one 1 retrogene
retro_ecab_883,
Echinops telfairi ENSETEG00000018837 ortholog_one2one 1 retrogene
retro_etel_1721,
Homo sapiens ENSG00000145782 ortholog_one2one 1 retrogene
retro_hsap_1860,
Gorilla gorilla ENSGGOG00000016888 ortholog_one2one 2 retrogenes
retro_ggor_1814, retro_ggor_2150,
Loxodonta africana ENSLAFG00000015307 ortholog_one2one 1 retrogene
retro_lafr_450,
Myotis lucifugus ENSMLUG00000002759 ortholog_one2one 1 retrogene
retro_mluc_2259,
Pongo abelii ENSPPYG00000015699 ortholog_one2one 3 retrogenes
retro_pabe_1518, retro_pabe_1519, retro_pabe_2158,
Pan troglodytes ENSPTRG00000017154 ortholog_one2one 2 retrogenes
retro_ptro_1240, retro_ptro_1748,
Ictidomys tridecemlineatus ENSSTOG00000011755 ortholog_one2many 1 retrogene
retro_itri_156,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2811 88.16 53.90
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Download FASTA sequences of all ENSRNOG00000000157 retrocopies