Parental gene:

HSP90AB1, ENSGGOG00000008889

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:6:45577401..45585288(+)


>ENSGGOG00000008889
ATGCCTGAGGAAGTGCACCATGGAGAGGAGGAGGTGGAGACTTTTGCCTTTCAGGCAGAAATTGCCCAACTCATGTCCCT
CATCATCAATACCTTCTATTCTAACAAGGAGATTTTCCTTCGGGAGTTGATCTCTAATGCTTCTGATGCCTTGGACAAGA
TTCGCTATGAGAGCCTGACAGACCCTTCGAAGTTGGACAGTGGTAAAGAGCTGAAAATTGACATCATCCCCAACCCTCAG
GAACGTACCCTGACTTTGGTAGACACAGGCATTGGCATGACCAAAGCTGATCTCATAAATAATTTGGGAACCATTGCCAA
GTCTGGTACTAAAGCATTCATGGAGGCTCTTCAGGCTGGTGCAGACATCTCCATGATTGGTCAGTTTGGTGTTGGCTTTT
ATTCTGCCTACTTGGTGGCAGAGAAAGTGGTTGTGATCACAAAGCACAACGATGATGAACAGTATGCTTGGGAGTCTTCT
GCTGGAGGTTCCTTCACTGTGCGTGCTGACCATGGTGAGCCCATTGGCAGGGGTACCAAAGTGATCCTCCATCTTAAAGA
AGATCAGACAGAGTACTTAGAAGAGAGGCGGGTCAAAGAAGTAGTGAAGAAGCATTCTCAGTTCATAGGCTATCCCATCA
CCCTTTATTTGGAGAAGGAACGAGAGAAGGAAATTAGTGATGATGAGGCAGAGGAAGAGAAAGGTGAGAAAGAAGAGGAA
GATAAAGATGATGAAGAAAAGCCCAAGATCGAAGATGTGGGTTCAGATGAGGAGGATGACAGCGGTAAGGATAAGAAGAA
GAAAACTAAGAAGATCAAAGAGAAATACATTGATCAGGAAGAACTAAACAAGACCAAGCCTATTTGGACCAGAAACCCTG
ATGACATCACCCAAGAGGAGTATGGAGAATTCTACAAGAGCCTCACTAATGACTGGGAAGACCACTTGGCAGTCAAGCAC
TTTTCTGTAGAAGGTCAGTTGGAATTCAGGGCATTGCTATTTATTCCTCGTCGGGCTCCCTTTGACCTTTTTGAGAACAA
GAAGAAAAAGAACAACATCAAACTCTATGTCCGCCGTGTGTTCATCATGGACAGCTGTGATGAGTTGATACCAGAGTATC
TCAATTTTATCCGTGGTGTGGTTGACTCTGAGGATCTGCCCCTGAACATCTCCCGAGAAATGCTCCAGCAGAGCAAAATC
TTGAAAGTCATTCGCAAAAACATTGTTAAGAAGTGCCTTGAGCTCTTCTCTGAGCTGGCAGAAGACAAGGAGAATTACAA
GAAATTCTATGAGGCATTCTCTAAAAATCTCAAGCTTGGAATCCACGAAGACTCCACTAACCGCCGCCGCCTGTCTGAGC
TGCTTCGCTATCATACCTCCCAGTCTGGAGATGAGATGACATCTCTGTCAGAGTATGTTTCTCGCATGAAGGAGACACAG
AAGTCCATCTATTACATCACTGGTGAGAGCAAAGAGCAGGTGGCCAACTCAGCTTTTGTGGAGCGAGTGCGGAAACGGGG
CTTCGAGGTGGTATATATGACCGAGCCCATTGACGAGTACTGTGTGCAGCAGCTCAAGGAATTTGATGGGAAGAGCCTGG
TCTCAGTTACCAAGGAGGGTCTGGAGCTGCCTGAGGATGAGGAGGAGAAGAAGAAGATGGAAGAGAGCAAGGCAAAGTTT
GAGAACCTCTGCAAGCTCATGAAAGAAATCTTAGATAAGAAGGTTGAGAAGGTGACAATCTCCAATAGACTTGTGTCTTC
ACCTTGCTGCATTGTGACCAGCACCTACGGCTGGACAGCCAATATGGAGCGGATCATGAAAGCCCAGGCACTTCGGGACA
ACTCCACCATGGGCTATATGATGGCCAAAAAGCACCTGGAGATCAACCCTGACCACCCCATTGTGGAGACGCTGCGGCAG
AAGGCTGAGGCCGACAAGAATGATAAGGCAGTTAAGGACCTGGTGGTGCTGCTGTTTGAAACCGCCCTGCTATCTTCTGG
CTTTTCCCTTGAGGATCCCCAGACCCACTCCAACCGCATCTACCGCATGATCAAGCTAGGTCTAGGTATTGATGAAGATG
AAGTGGCAGCAGAGGAACCCAGTGCTGCAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATGCGTCTCGCATG
GAAGAAGTCGATTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1293 .27 RPM
SRP007412_cerebellum 663 .62 RPM
SRP007412_heart 370 .98 RPM
SRP007412_kidney 681 .82 RPM
SRP007412_liver 404 .90 RPM
SRP007412_testis 571 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001981 possible_ortholog 4 retrogenes
retro_cfam_1108, retro_cfam_411, retro_cfam_562, retro_cfam_881,
Felis catus ENSFCAG00000009764 possible_ortholog 1 retrogene
retro_fcat_1177,
Macropus eugenii ENSMEUG00000013735 ortholog_one2many 1 retrogene
retro_meug_1896,
Myotis lucifugus ENSMLUG00000005239 possible_ortholog 2 retrogenes
retro_mluc_1604, retro_mluc_865,
Mus musculus ENSMUSG00000023944 possible_ortholog 3 retrogenes
retro_mmus_1916, retro_mmus_3528, retro_mmus_856,
Otolemur garnettii ENSOGAG00000011961 ortholog_one2one 1 retrogene
retro_ogar_2574,
Pongo abelii ENSPPYG00000016655 ortholog_one2one 2 retrogenes
retro_pabe_2425, retro_pabe_415,
Pan troglodytes ENSPTRG00000018217 ortholog_one2one 4 retrogenes
retro_ptro_1850, retro_ptro_1968, retro_ptro_2003, retro_ptro_880,
Tupaia belangeri ENSTBEG00000014873 ortholog_one2one 1 retrogene
retro_tbel_1428,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_701 81.00 61.05
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2. retro_ggor_1011 76.16 77.07
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Download FASTA sequences of all ENSGGOG00000008889 retrocopies