Parental gene:

NAP1L1, ENSGGOG00000003883

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:12:74675935..74714066(-)


>ENSGGOG00000003883
ATGGCAGACATTGACAACAAAGAACAGTCTGAACTTGATCAAGATTTGGATGATGTTGAAGAAGTAGAAGAAGAGGAAAC
TGGTGAAGAAACAAAAATCAAAGCACGTCAGCTAACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCCCTTCAAG
AAAGACTTGATGGTCTGGTAGAAACACCAACAGGATACATTGAAAGCCTGCCTAGGGTAGTTAAAAGACGAGTGAATGCT
CTCAAAAACCTGCAAGTTAAATGTGCACAGATAGAAGCCAAATTCTATGAGGAAGTTCACGATCTTGAAAGGAAGTATGC
TGTTCTCTATCAGCCTCTATTTGATAAGCGATTTGAAATTATTAATGCAATTTATGAACCTACGGAAGAAGAGTGTGAAT
GGAAACCAGATGAAGAAGATGAGATTTCGGAGGAATTGAAAGAAAAGGCCAAGATTGAAGATGAGAAAAAGGATGAAGAA
AAAGAAGACCCCAAAGGAATTCCTGAATTTTGGTTAACTGTTTTTAAGAATGTTGACTTGCTCAGTGATATGGTTCAGGA
ACACGATGAACCTATTCTGAAGCACTTGAAAGATATTAAAGTGAAGTTCTCAGATGCTGGCCAGCCTATGAGTTTTGTCT
TAGAATTTCACTTTGAACCCAATGAATATTTTACAAATGAAGTGCTGACAAAGACATACAGGATGAGGTCAGAACCAGAT
GATTCTGATCCCTTTTCTTTTGATGGACCAGAAATTATGGGTTGTACAGGGTGCCAGATAGATTGGAAAAAAGGAAAGAA
TGTCACTTTGAAAACTATTAAGAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACTAAAACAGTTTCCA
ATGACTCTTTCTTTAACTTTTTTGCCCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGATGATGCTGAAGCTATCCTT
GCTGCAGACTTTGAAATTGGTCACTTTTTACGTGAGCGTATAATCCCAAGATCAGTGTTATATTTTACTGGAGAAGCTAT
TGAAGATGATGATGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGGAGATGAGGAAAATG
ATCCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 129 .52 RPM
SRP007412_cerebellum 70 .21 RPM
SRP007412_heart 37 .62 RPM
SRP007412_kidney 111 .42 RPM
SRP007412_liver 56 .19 RPM
SRP007412_testis 174 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 possible_ortholog 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Callithrix jacchus ENSCJAG00000001115 ortholog_one2one 1 retrogene
retro_cjac_534,
Felis catus ENSFCAG00000000279 ortholog_one2one 1 retrogene
retro_fcat_1037,
Homo sapiens ENSG00000187109 ortholog_one2one 3 retrogenes
retro_hsap_1199, retro_hsap_2696, retro_hsap_833,
Gorilla gorilla ENSGGOG00000013223 within_species_paralog 1 retrogene
retro_ggor_423,
Macropus eugenii ENSMEUG00000013702 ortholog_one2many 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 possible_ortholog 1 retrogene
retro_mmul_233,
Monodelphis domestica ENSMODG00000020456 ortholog_many2many 4 retrogenes
retro_mdom_1476, retro_mdom_1638, retro_mdom_520, retro_mdom_724,
Mustela putorius furo ENSMPUG00000017474 ortholog_one2one 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 possible_ortholog 1 retrogene
retro_mmus_263,
Nomascus leucogenys ENSNLEG00000004682 ortholog_one2one 4 retrogenes
retro_nleu_1192, retro_nleu_2085, retro_nleu_265, retro_nleu_2766,
Otolemur garnettii ENSOGAG00000010319 ortholog_one2one 4 retrogenes
retro_ogar_1278, retro_ogar_1281, retro_ogar_3357, retro_ogar_666,
Pan troglodytes ENSPTRG00000005240 ortholog_one2one 4 retrogenes
retro_ptro_1820, retro_ptro_582, retro_ptro_694, retro_ptro_819,
Pteropus vampyrus ENSPVAG00000016032 possible_ortholog 2 retrogenes
retro_pvam_1282, retro_pvam_306,
Rattus norvegicus ENSRNOG00000003890 possible_ortholog 1 retrogene
retro_rnor_150,
Ictidomys tridecemlineatus ENSSTOG00000003046 possible_ortholog 2 retrogenes
retro_itri_1007, retro_itri_416,
Vicugna pacos ENSVPAG00000007290 ortholog_one2one 3 retrogenes
retro_vpac_435, retro_vpac_441, retro_vpac_601,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_686 88.32 50.13
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2. retro_ggor_934 80.10 98.21
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3. retro_ggor_1879 80.58 61.64
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Download FASTA sequences of all ENSGGOG00000003883 retrocopies