Parental gene:

PSMC6, ENSGGOG00000002152

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:14:33457564..33478287(+)


>ENSGGOG00000002152
ATGGCCATTCCCGGCATCCCCTATGAGAGACGGCTTCTCATCATGGCGGACCCTAGAGATAAGGCGCTTCAGGACTACCG
CAAGAAGTTGCTTGAGCACAAGGAGATCGACGGCCGTCTTAAGGAGTTAAGGGAACAATTAAAAGAACTTACCAAGCAGT
ATGAAAAGTCTGAAAATGATCTGAAGGCCCTACAGAGTGTTGGGCAGATTGTGGGTGAAGTGCTTAAACAGTTAACTGAA
GAAAAATTCATTGTTAAAGCTACCAATGGACCAAGATATGTTGTGGGTTGTCGTCGACAGCTTGACAAAAGTAAGCTGAA
GCCAGGAACAAGAGTTGCTTTGGATATGACTACACTAACTATCATGAGATATTTGCCAAGAGAGGTGGATCCACTGGTTT
ATAACATGTCTCATGAGGACCCTGGGAATGTTTCTTATTCTGAGATTGGAGGGCTATCAGAACAGATCCGGGAATTAAGA
GAGGTGATAGAATTACCTCTTACAAACCCAGAGTTATTTCAGCGTGTAGGAATAATACCTCCAAAAGGCTGTTTGTTATA
TGGACCACCAGGTACGGGAAAAACACTCTTGGCACGAGCCGTTGCTAGCCAGCTGGACTGCAATTTCTTAAAGGTTGTAT
CTAGTTCTATTGTAGACAAGTACATTGGTGAAAGTGCTCGTTTGATCAGAGAAATGTTTAATTATGCTAGAGATCATCAA
CCATGCATCATTTTTATGGATGAAATAGATGCTATTGGTGGTCGTCGGTTTTCTGAGGGTACTTCAGCTGACAGAGAGAT
TCAGAGAACGTTAATGGAGTTACTGAATCAAATGGATGGATTTGATACTCTGCATAGAGTTAAAATGATCATGGCTACAA
ACAGACCAGATACACTGGATCCTGCTTTGCTGCGTCCAGGAAGATTAGATAGAAAAATACATATTGATTTGCCAAATGAA
CAAGCAAGATTAGACATACTGAAAATCCATGCAGGTCCCATTACAAAGCATGGTGAAATAGATTATGAAGCAATTGTGAA
GCTTTCGGATGGCTTTAATGGAGCAGATCTGAGAAATGTTTGTACTGAAGCAGGTATGTTCGCAATTCGTGCTGATCATG
ATTTTGTAGTACAGGAAGACTTCATGAAAGCAGTCAGAAAAGTGGCTGATTCTAAGAAGCTGGAGTCTAAATTGGACTAC
AAACCTGTGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .57 RPM
SRP007412_cerebellum 15 .17 RPM
SRP007412_heart 5 .97 RPM
SRP007412_kidney 26 .95 RPM
SRP007412_liver 22 .03 RPM
SRP007412_testis 21 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007126 ortholog_one2many 2 retrogenes
retro_cjac_204, retro_cjac_3221,
Cavia porcellus ENSCPOG00000009477 ortholog_one2many 1 retrogene
retro_cpor_47,
Homo sapiens ENSG00000100519 ortholog_one2one 2 retrogenes
retro_hsap_1022, retro_hsap_4059,
Macropus eugenii ENSMEUG00000007084 ortholog_one2one 3 retrogenes
retro_meug_1700, retro_meug_2090, retro_meug_923,
Monodelphis domestica ENSMODG00000014500 ortholog_one2one 1 retrogene
retro_mdom_438,
Nomascus leucogenys ENSNLEG00000012518 ortholog_one2one 2 retrogenes
retro_nleu_559, retro_nleu_900,
Otolemur garnettii ENSOGAG00000010011 ortholog_one2one 1 retrogene
retro_ogar_3101,
Pongo abelii ENSPPYG00000005820 ortholog_one2one 2 retrogenes
retro_pabe_3334, retro_pabe_858,
Pan troglodytes ENSPTRG00000006352 ortholog_one2one 2 retrogenes
retro_ptro_2752, retro_ptro_699,
Rattus norvegicus ENSRNOG00000007203 ortholog_one2one 1 retrogene
retro_rnor_1480,
Tursiops truncatus ENSTTRG00000003880 ortholog_one2one 1 retrogene
retro_ttru_117,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_808 87.82 97.77
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ggor_2727 97.70 97.27
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000002152 retrocopies