Parental gene:

CMC1, ENSG00000187118

Aliases:None
Description:COX assembly mitochondrial protein 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28783]
Organism:Human (Homo sapiens)
Coordinates:3:28283074..28366633(+)


>ENSG00000187118
ATGGCGCTCGACCCCGCAGACCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAAAATAATGAGAGAAAAGGC
CAAAGAGAGGTGTTCTGAACAAGTTCAAGATTTTACCAAATGTTGCAAGAACTCTGGAGTTCTTATGGTAGTAAAATGCC
GGAAAGAAAATTCTGCATTGAAAGAATGTCTAACTGCTTACTATAATGATCCAGCCTTTTATGAAGAATGCAAAATGGAA
TACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTCCTACAAAGAAAAGGCTACAGAAGCTTCCAACAAGCATGTA
G

Library Parental gene expression (RPM)
bodymap2_adipose 6 .04 RPM
bodymap2_adrenal 19 .73 RPM
bodymap2_brain 7 .76 RPM
bodymap2_breast 11 .48 RPM
bodymap2_colon 11 .08 RPM
bodymap2_heart 11 .72 RPM
bodymap2_kidney 18 .94 RPM
bodymap2_liver 10 .98 RPM
bodymap2_lung 17 .14 RPM
bodymap2_lymph_node 26 .09 RPM
bodymap2_ovary 9 .54 RPM
bodymap2_prostate 9 .47 RPM
bodymap2_skeletal_muscle 3 .06 RPM
bodymap2_testis 20 .15 RPM
bodymap2_thyroid 7 .12 RPM
bodymap2_white_blood_cells 33 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004272 ortholog_one2one 2 retrogenes
retro_cjac_2600, retro_cjac_2653,
Dasypus novemcinctus ENSDNOG00000018923 ortholog_one2one 2 retrogenes
retro_dnov_111, retro_dnov_651,
Gorilla gorilla ENSGGOG00000012406 ortholog_one2one 4 retrogenes
retro_ggor_1067, retro_ggor_2196, retro_ggor_2245, retro_ggor_786,
Microcebus murinus ENSMICG00000011702 ortholog_one2one 2 retrogenes
retro_mmur_366, retro_mmur_759,
Myotis lucifugus ENSMLUG00000000044 ortholog_one2one 2 retrogenes
retro_mluc_1063, retro_mluc_759,
Nomascus leucogenys ENSNLEG00000004066 ortholog_one2one 4 retrogenes
retro_nleu_1075, retro_nleu_2763, retro_nleu_2830, retro_nleu_949,
Oryctolagus cuniculus ENSOCUG00000012793 ortholog_one2one 2 retrogenes
retro_ocun_1592, retro_ocun_1637,
Ochotona princeps ENSOPRG00000009474 ortholog_one2one 1 retrogene
retro_opri_463,
Pongo abelii ENSPPYG00000014054 ortholog_one2one 4 retrogenes
retro_pabe_1139, retro_pabe_1533, retro_pabe_2677, retro_pabe_833,
Pan troglodytes ENSPTRG00000014706 ortholog_one2one 4 retrogenes
retro_ptro_1207, retro_ptro_2181, retro_ptro_763, retro_ptro_942,
Rattus norvegicus ENSRNOG00000010149 ortholog_one2one 1 retrogene
retro_rnor_914,
Sorex araneus ENSSARG00000001629 ortholog_one2one 1 retrogene
retro_sara_186,
Tupaia belangeri ENSTBEG00000002573 ortholog_one2one 4 retrogenes
retro_tbel_3026, retro_tbel_3858, retro_tbel_4018, retro_tbel_4214,
Tarsius syrichta ENSTSYG00000011371 ortholog_one2one 2 retrogenes
retro_tsyr_1764, retro_tsyr_178,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_984 66.30 86.79
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2. retro_hsap_1372 83.84 85.84
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3. retro_hsap_1764 75.28 78.76
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4. retro_hsap_3229 75.25 87.61
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Download FASTA sequences of all ENSG00000187118 retrocopies