Parental gene:

MRPL48, ENSG00000175581

Aliases:None
Description:mitochondrial ribosomal protein L48 [Source:HGNC Symbol;Acc:16653]
Organism:Human (Homo sapiens)
Coordinates:11:73498360..73576178(+)


>ENSG00000175581
ATGAGCGGAACCTTGGAAAAGGTGCTGTGCCTGAGGAACAATACCATTTTTAAGCAAGCCTTTTCTCTCTTAAGGTTTAG
AACTTCAGGAGAGAAGCCCATCTATTCTGTAGGTGGAATTCTACTAAGTATCAGTCGGCCCTACAAGACAAAGCCCACCC
ACGGCATTGGAAAGTACAAGCACTTAATTAAAGCAGAAGAGCCCAAGAAGAAGAAGGGAAAAGTGGAAGTGAGAGCCATT
AATTTGGGGACAGATTATGAATATGGGGTTTTAAATATTCATCTGACTGCATATGATATGACCCTGGCAGAGAGTTATGC
CCAGTATGTTCACAACCTCTGCAACTCTCTCTCCATTAAAGTCGAGGAAAGTTATGCAATGCCAACCAAAACCATAGAAG
TGTTGCAGTTGCAGGACCAAGGCAGCAAAATGCTCCTGGACTCAGTGCTTACCACCCATGAGCGAGTGGTTCAGATCAGC
GGTTTGAGTGCTACGTTTGCAGAAATTTTCTTGGAAATAATCCAAAGCAGTCTTCCTGAAGGAGTCAGACTGTCAGTGAA
GGAGCACACTGAAGAAGACTTCAAGGGACGATTCAAAGCTCGACCAGAACTGGAAGAACTGTTGGCCAAGTTGAAGTAG

Library Parental gene expression (RPM)
bodymap2_adipose 9 .26 RPM
bodymap2_adrenal 22 .23 RPM
bodymap2_brain 23 .28 RPM
bodymap2_breast 12 .41 RPM
bodymap2_colon 18 .62 RPM
bodymap2_heart 13 .02 RPM
bodymap2_kidney 20 .83 RPM
bodymap2_liver 13 .08 RPM
bodymap2_lung 9 .34 RPM
bodymap2_lymph_node 13 .47 RPM
bodymap2_ovary 19 .89 RPM
bodymap2_prostate 22 .85 RPM
bodymap2_skeletal_muscle 5 .73 RPM
bodymap2_testis 10 .63 RPM
bodymap2_thyroid 17 .42 RPM
bodymap2_white_blood_cells 20 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005585 ortholog_one2many 1 retrogene
retro_cfam_1437,
Mustela putorius furo ENSMPUG00000009716 possible_ortholog 1 retrogene
retro_mputfur_38,
Mus musculus ENSMUSG00000030706 ortholog_one2one 2 retrogenes
retro_mmus_2478, retro_mmus_563,
Nomascus leucogenys ENSNLEG00000017097 ortholog_one2one 1 retrogene
retro_nleu_1376,
Oryctolagus cuniculus ENSOCUG00000009302 ortholog_one2many 1 retrogene
retro_ocun_39,
Otolemur garnettii ENSOGAG00000004771 ortholog_one2many 1 retrogene
retro_ogar_234,
Pan troglodytes ENSPTRG00000004049 ortholog_one2one 1 retrogene
retro_ptro_2417,
Tursiops truncatus ENSTTRG00000005403 ortholog_one2one 2 retrogenes
retro_ttru_1123, retro_ttru_297,
Vicugna pacos ENSVPAG00000004657 ortholog_one2one 1 retrogene
retro_vpac_538,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3557 88.63 99.53
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Download FASTA sequences of all ENSG00000175581 retrocopies