Parental gene:

RPL23, ENSG00000125691

Aliases:None
Description:ribosomal protein L23 [Source:HGNC Symbol;Acc:10316]
Organism:Human (Homo sapiens)
Coordinates:17:37004117..37010096(-)


>ENSG00000125691
ATGTCGAAGCGAGGACGTGGTGGGTCCTCTGGTGCGAAATTCCGGATTTCCTTGGGTCTTCCGGTAGGAGCTGTAATCAA
TTGTGCTGACAACACAGGAGCCAAAAACCTGTATATCATCTCCGTGAAGGGGATCAAGGGACGGCTGAACAGACTTCCCG
CTGCTGGTGTGGGTGACATGGTGATGGCCACAGTCAAGAAAGGCAAACCAGAGCTCAGAAAAAAGGTACATCCAGCAGTG
GTCATTCGACAACGAAAGTCATACCGTAGAAAAGATGGCGTGTTTCTTTATTTTGAAGATAATGCAGGAGTCATAGTGAA
CAATAAAGGCGAGATGAAAGGTTCTGCCATTACAGGACCAGTAGCAAAGGAGTGTGCAGACTTGTGGCCCCGGATTGCAT
CCAATGCTGGCAGCATTGCATGA

Library Parental gene expression (RPM)
bodymap2_adipose 648 .40 RPM
bodymap2_adrenal 671 .03 RPM
bodymap2_brain 181 .66 RPM
bodymap2_breast 478 .08 RPM
bodymap2_colon 795 .05 RPM
bodymap2_heart 211 .75 RPM
bodymap2_kidney 330 .39 RPM
bodymap2_liver 243 .03 RPM
bodymap2_lung 749 .49 RPM
bodymap2_lymph_node 752 .78 RPM
bodymap2_ovary 891 .59 RPM
bodymap2_prostate 911 .16 RPM
bodymap2_skeletal_muscle 556 .95 RPM
bodymap2_testis 483 .20 RPM
bodymap2_thyroid 340 .24 RPM
bodymap2_white_blood_cells 835 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004268 possible_ortholog 6 retrogenes
retro_amel_1791, retro_amel_226, retro_amel_308, retro_amel_880, retro_amel_918, retro_amel_990,
Callithrix jacchus ENSCJAG00000008311 ortholog_one2one 9 retrogenes
retro_cjac_1129, retro_cjac_1483, retro_cjac_2283, retro_cjac_2598, retro_cjac_2639, retro_cjac_2772, retro_cjac_2885, retro_cjac_3128, retro_cjac_3831,
Dipodomys ordii ENSDORG00000001372 ortholog_one2one 3 retrogenes
retro_dord_366, retro_dord_475, retro_dord_530,
Felis catus ENSFCAG00000014502 ortholog_one2one 10 retrogenes
retro_fcat_1022, retro_fcat_1431, retro_fcat_1707, retro_fcat_1708, retro_fcat_1959, retro_fcat_242, retro_fcat_296, retro_fcat_716, retro_fcat_756, retro_fcat_859,
Latimeria chalumnae ENSLACG00000004430 ortholog_one2many 1 retrogene
retro_lcha_16,
Macaca mulatta ENSMMUG00000004502 possible_ortholog 9 retrogenes
retro_mmul_1598, retro_mmul_1705, retro_mmul_1955, retro_mmul_2366, retro_mmul_2391, retro_mmul_384, retro_mmul_928, retro_mmul_930, retro_mmul_935,
Nomascus leucogenys ENSNLEG00000000642 possible_ortholog 7 retrogenes
retro_nleu_1506, retro_nleu_181, retro_nleu_2056, retro_nleu_2337, retro_nleu_2988, retro_nleu_574, retro_nleu_8,
Oryctolagus cuniculus ENSOCUG00000013915 ortholog_one2one 6 retrogenes
retro_ocun_1027, retro_ocun_1196, retro_ocun_1270, retro_ocun_1919, retro_ocun_251, retro_ocun_482,
Otolemur garnettii ENSOGAG00000012445 possible_ortholog 7 retrogenes
retro_ogar_1050, retro_ogar_1645, retro_ogar_1695, retro_ogar_2250, retro_ogar_277, retro_ogar_3145, retro_ogar_539,
Ochotona princeps ENSOPRG00000001957 possible_ortholog 10 retrogenes
retro_opri_1079, retro_opri_1216, retro_opri_137, retro_opri_14, retro_opri_178, retro_opri_202, retro_opri_224, retro_opri_481, retro_opri_639, retro_opri_684,
Rattus norvegicus ENSRNOG00000004107 possible_ortholog 10 retrogenes
retro_rnor_1195, retro_rnor_1539, retro_rnor_1622, retro_rnor_2445, retro_rnor_2483, retro_rnor_2688, retro_rnor_2981, retro_rnor_347, retro_rnor_498, retro_rnor_941,
Ictidomys tridecemlineatus ENSSTOG00000014279 ortholog_one2one 2 retrogenes
retro_itri_122, retro_itri_1577,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_556 60.99 98.57
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2. retro_hsap_2211 69.32 62.14
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3. retro_hsap_2213 79.56 97.86
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4. retro_hsap_2522 76.60 100.00
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5. retro_hsap_3581 89.44 100.00
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6. retro_hsap_3708 88.65 100.00
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7. retro_hsap_3710 81.12 100.00
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8. retro_hsap_4042 75.20 88.57
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9. retro_hsap_4106 52.38 72.86
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Download FASTA sequences of all ENSG00000125691 retrocopies