Parental gene:

RPL21, ENSG00000122026

Aliases:RPL21, L21
Description:ribosomal protein L21 [Source:HGNC Symbol;Acc:10313]
Organism:Human (Homo sapiens)
Coordinates:13:27825445..27830828(+)


>ENSG00000122026
ATGACGAACACAAAGGGAAAGAGGAGAGGCACCCGATATATGTTCTCTAGGCCTTTTAGAAAACATGGAGTTGTTCCTTT
GGCCACATATATGCGAATCTATAAGAAAGGTGATATTGTAGACATCAAGGGAATGGGTACTGTTCAAAAAGGAATGCCCC
ACAAGTGTTACCATGGCAAAACTGGAAGAGTCTACAATGTTACCCAGCATGCTGTTGGCATTGTTGTAAACAAACAAGTT
AAGGGCAAGATTCTTGCCAAGAGAATTAATGTGCGTATTGAGCACATTAAGCACTCTAAGAGCCGAGATAGCTTCCTGAA
ACGTGTGAAGGAAAATGATCAGAAAAAGAAAGAAGCCAAAGAGAAAGGTACCTGGGTTCAACTAAAGCGCCAGCCTGCTC
CACCCAGAGAAGCACACTTTGTGAGAACCAATGGGAAGGAGCCTGAGCTGCTGGAACCTATTCCCTATGAATTCATGGCA
TAA

Library Parental gene expression (RPM)
bodymap2_adipose 80 .68 RPM
bodymap2_adrenal 121 .12 RPM
bodymap2_brain 35 .89 RPM
bodymap2_breast 60 .37 RPM
bodymap2_colon 99 .58 RPM
bodymap2_heart 111 .91 RPM
bodymap2_kidney 84 .83 RPM
bodymap2_liver 89 .65 RPM
bodymap2_lung 422 .43 RPM
bodymap2_lymph_node 336 .42 RPM
bodymap2_ovary 157 .01 RPM
bodymap2_prostate 418 .56 RPM
bodymap2_skeletal_muscle 150 .89 RPM
bodymap2_testis 54 .92 RPM
bodymap2_thyroid 74 .87 RPM
bodymap2_white_blood_cells 422 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001648 possible_ortholog 5 retrogenes
retro_btau_1383, retro_btau_194, retro_btau_209, retro_btau_93, retro_btau_976,
Latimeria chalumnae ENSLACG00000012678 ortholog_one2one 1 retrogene
retro_lcha_32,
Loxodonta africana ENSLAFG00000003677 possible_ortholog 11 retrogenes
retro_lafr_1167, retro_lafr_308, retro_lafr_331, retro_lafr_583, retro_lafr_63, retro_lafr_652, retro_lafr_738, retro_lafr_740, retro_lafr_856, retro_lafr_89, retro_lafr_97,
Myotis lucifugus ENSMLUG00000010093 possible_ortholog 46 retrogenes
retro_mluc_1066, retro_mluc_1079, retro_mluc_1138, retro_mluc_1164, retro_mluc_1171, retro_mluc_1219, retro_mluc_1274, retro_mluc_1279, retro_mluc_1307, retro_mluc_1323, retro_mluc_1379, retro_mluc_1382, retro_mluc_1409, retro_mluc_1413, retro_mluc_1469, retro_mluc_1481, retro_mluc_1525, retro_mluc_162, retro_mluc_1647, retro_mluc_1753, retro_mluc_1803, retro_mluc_1849, retro_mluc_1862, retro_mluc_1929, retro_mluc_1969, retro_mluc_1981, retro_mluc_2044, retro_mluc_2077, retro_mluc_2109, retro_mluc_2121, retro_mluc_2212, retro_mluc_230, retro_mluc_2335, retro_mluc_2338, retro_mluc_2436, retro_mluc_2592, retro_mluc_27, retro_mluc_279, retro_mluc_360, retro_mluc_503, retro_mluc_554, retro_mluc_620, retro_mluc_631, retro_mluc_806, retro_mluc_961, retro_mluc_97,
Monodelphis domestica ENSMODG00000008923 ortholog_one2many 1 retrogene
retro_mdom_156,
Mus musculus ENSMUSG00000041453 possible_ortholog 101 retrogenes
retro_mmus_1012, retro_mmus_1046, retro_mmus_1057, retro_mmus_1083, retro_mmus_1123, retro_mmus_1199, retro_mmus_1287, retro_mmus_1354, retro_mmus_1461, retro_mmus_1475, retro_mmus_1529, retro_mmus_1561, retro_mmus_1572, retro_mmus_1596, retro_mmus_1617, retro_mmus_1641, retro_mmus_1644, retro_mmus_17, retro_mmus_1714, retro_mmus_1739, retro_mmus_1762, retro_mmus_1797, retro_mmus_1848, retro_mmus_1860, retro_mmus_1862, retro_mmus_1875, retro_mmus_1897, retro_mmus_1915, retro_mmus_1931, retro_mmus_1936, retro_mmus_1994, retro_mmus_2042, retro_mmus_2049, retro_mmus_2101, retro_mmus_2130, retro_mmus_2176, retro_mmus_2179, retro_mmus_2185, retro_mmus_2214, retro_mmus_2233, retro_mmus_2237, retro_mmus_2238, retro_mmus_2279, retro_mmus_2309, retro_mmus_2312, retro_mmus_2335, retro_mmus_2344, retro_mmus_2395, retro_mmus_2447, retro_mmus_2517, retro_mmus_2567, retro_mmus_2585, retro_mmus_2598, retro_mmus_266, retro_mmus_2662, retro_mmus_2698, retro_mmus_2707, retro_mmus_2778, retro_mmus_2808, retro_mmus_2853, retro_mmus_2874, retro_mmus_2945, retro_mmus_2980, retro_mmus_3035, retro_mmus_3055, retro_mmus_3085, retro_mmus_3103, retro_mmus_3112, retro_mmus_3220, retro_mmus_3252, retro_mmus_3261, retro_mmus_3295, retro_mmus_3318, retro_mmus_3328, retro_mmus_333, retro_mmus_3341, retro_mmus_3446, retro_mmus_3545, retro_mmus_3581, retro_mmus_3712, retro_mmus_397, retro_mmus_400, retro_mmus_401, retro_mmus_598, retro_mmus_601, retro_mmus_606, retro_mmus_663, retro_mmus_734, retro_mmus_735, retro_mmus_758, retro_mmus_782, retro_mmus_806, retro_mmus_835, retro_mmus_862, retro_mmus_883, retro_mmus_918, retro_mmus_932, retro_mmus_940, retro_mmus_957, retro_mmus_993, retro_mmus_998,
Pan troglodytes ENSPTRG00000005728 ortholog_one2one 1 retrogene
retro_ptro_66,
Rattus norvegicus ENSRNOG00000000957 possible_ortholog 13 retrogenes
retro_rnor_227, retro_rnor_298, retro_rnor_319, retro_rnor_329, retro_rnor_330, retro_rnor_333, retro_rnor_365, retro_rnor_366, retro_rnor_416, retro_rnor_5, retro_rnor_79, retro_rnor_81, retro_rnor_82,
Sarcophilus harrisii ENSSHAG00000000845 ortholog_one2one 11 retrogenes
retro_shar_224, retro_shar_446, retro_shar_499, retro_shar_531, retro_shar_534, retro_shar_601, retro_shar_664, retro_shar_67, retro_shar_683, retro_shar_729, retro_shar_757,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_122 91.88 100.00
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2. retro_hsap_143 61.11 66.25
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3. retro_hsap_160 82.79 75.62
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4. retro_hsap_252 77.50 98.12
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5. retro_hsap_362 85.19 100.00
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6. retro_hsap_367 93.75 100.00
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7. retro_hsap_381 76.73 98.12
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8. retro_hsap_424 58.76 60.00
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9. retro_hsap_496 96.25 100.00
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10. retro_hsap_503 99.38 100.00
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11. retro_hsap_563 79.75 97.50
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12. retro_hsap_573 64.58 86.25
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13. retro_hsap_582 71.43 100.00
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14. retro_hsap_626 81.53 98.12
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15. retro_hsap_654 96.25 100.00
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16. retro_hsap_738 100.00 100.00
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17. retro_hsap_752 95.62 100.00
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18. retro_hsap_819 77.02 100.00
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19. retro_hsap_900 79.87 98.75
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20. retro_hsap_965 87.96 66.88
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21. retro_hsap_1007 77.14 86.88
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22. retro_hsap_1011 76.03 99.18
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23. retro_hsap_1019 76.07 100.00
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24. retro_hsap_1032 96.88 100.00
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25. retro_hsap_1040 74.53 100.00
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26. retro_hsap_1099 74.59 99.18
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27. retro_hsap_1107 84.71 96.88
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28. retro_hsap_1213 72.80 77.50
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29. retro_hsap_1218 83.54 97.50
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30. retro_hsap_1280 69.17 74.38
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31. retro_hsap_1288 76.92 63.75
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32. retro_hsap_1298 76.92 96.25
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33. retro_hsap_1379 83.20 77.50
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34. retro_hsap_1381 82.72 100.00
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35. retro_hsap_1419 79.12 56.88
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36. retro_hsap_1430 87.83 71.88
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37. retro_hsap_1446 81.60 76.88
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38. retro_hsap_1453 95.62 100.00
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39. retro_hsap_1505 87.58 100.00
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40. retro_hsap_1576 72.17 71.25
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41. retro_hsap_1578 88.82 100.00
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42. retro_hsap_1600 92.50 100.00
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43. retro_hsap_1663 99.37 99.38
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44. retro_hsap_1712 95.00 100.00
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45. retro_hsap_1723 66.67 62.50
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46. retro_hsap_1734 96.30 84.38
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47. retro_hsap_1757 89.44 100.00
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48. retro_hsap_1805 79.63 100.00
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49. retro_hsap_1842 70.16 77.50
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50. retro_hsap_1886 75.78 100.00
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51. retro_hsap_1904 87.50 100.00
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52. retro_hsap_1920 92.50 100.00
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53. retro_hsap_2050 92.50 100.00
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54. retro_hsap_2088 76.81 85.62
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55. retro_hsap_2109 82.61 56.88
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56. retro_hsap_2153 85.19 66.88
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57. retro_hsap_2178 82.91 98.12
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58. retro_hsap_2221 82.93 100.00
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59. retro_hsap_2245 82.93 76.25
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60. retro_hsap_2258 78.91 79.38
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61. retro_hsap_2266 93.79 100.00
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62. retro_hsap_2357 70.81 98.75
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63. retro_hsap_2442 88.05 98.75
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64. retro_hsap_2625 82.50 100.00
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65. retro_hsap_2635 84.03 97.54
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66. retro_hsap_2655 86.52 55.00
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67. retro_hsap_2716 81.19 61.88
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68. retro_hsap_2855 95.62 100.00
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69. retro_hsap_2876 76.10 98.75
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70. retro_hsap_2916 96.88 100.00
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71. retro_hsap_2937 67.08 99.38
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72. retro_hsap_3037 74.53 100.00
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73. retro_hsap_3039 83.67 61.25
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74. retro_hsap_3091 80.17 75.00
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75. retro_hsap_3094 98.12 100.00
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76. retro_hsap_3119 80.86 100.00
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77. retro_hsap_3160 65.10 92.50
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78. retro_hsap_3185 74.05 98.12
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79. retro_hsap_3264 69.39 60.62
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80. retro_hsap_3304 84.18 98.12
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81. retro_hsap_3375 79.43 86.88
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82. retro_hsap_3429 79.01 100.00
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83. retro_hsap_3435 86.79 99.38
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84. retro_hsap_3521 80.86 100.00
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85. retro_hsap_3555 86.34 100.00
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86. retro_hsap_3558 75.78 100.00
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87. retro_hsap_3628 83.17 63.12
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88. retro_hsap_3658 67.12 89.38
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89. retro_hsap_3662 79.31 95.08
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90. retro_hsap_3688 91.93 100.00
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91. retro_hsap_3694 77.85 91.88
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92. retro_hsap_3705 99.38 100.00
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93. retro_hsap_3747 80.83 73.75
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94. retro_hsap_3764 79.49 71.88
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95. retro_hsap_3911 68.87 63.75
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96. retro_hsap_3945 81.37 100.00
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97. retro_hsap_3955 85.00 61.25
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98. retro_hsap_4092 67.62 65.00
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99. retro_hsap_4193 86.25 100.00
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100. retro_hsap_4276 86.34 99.38
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101. retro_hsap_4283 71.17 97.50
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102. retro_hsap_4286 69.17 74.38
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103. retro_hsap_4302 83.23 100.00
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104. retro_hsap_4713 93.75 100.00
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105. retro_hsap_4733 82.11 59.38
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Download FASTA sequences of all ENSG00000122026 retrocopies