Parental gene: | PAFAH1B1, ENSG00000007168 |
| Aliases: | PAFAH1B1, LIS1, LIS2, MDCR, MDS, PAFAH |
| Description: | platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) [Source:HGNC Symbol;Acc:8574] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:2496503..2588909(+) |
>ENSG00000007168
ATGGTGCTGTCCCAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGC
ATATTCAGTTTTTAAAAAGGAAGCTGAATTAGATGTGAATGAAGAATTAGATAAAAAGTATGCTGGTCTTTTGGAAAAAA
AATGGACATCTGTTATTAGATTACAAAAGAAGGTTATGGAATTAGAATCAAAGCTAAATGAAGCAAAAGAAGAATTTACG
TCAGGTGGACCTCTTGGTCAGAAACGAGACCCAAAAGAATGGATTCCCCGTCCGCCAGAAAAATATGCATTGAGTGGTCA
CAGGAGTCCAGTCACTCGAGTCATTTTCCATCCTGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGG
TGTGGGATTATGAGACTGGAGATTTTGAACGAACTCTTAAAGGACATACAGACTCTGTACAGGACATTTCATTCGACCAC
AGCGGCAAGCTTCTGGCTTCCTGTTCTGCAGATATGACCATTAAACTATGGGATTTTCAGGGCTTTGAATGCATCAGAAC
CATGCACGGCCATGACCACAATGTTTCTTCAGTAGCCATCATGCCCAATGGAGATCATATAGTGTCTGCCTCAAGGGATA
AAACTATAAAAATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACATTCACAGGACACAGAGAATGGGTACGTATGGTA
CGGCCAAATCAAGATGGCACTCTGATAGCCAGCTGTTCCAATGACCAGACTGTGCGTGTATGGGTCGTAGCAACAAAGGA
ATGCAAGGCTGAGCTCCGAGAGCATGAGCATGTGGTAGAATGCATTTCCTGGGCTCCAGAAAGCTCATATTCCTCCATCT
CTGAAGCAACAGGATCTGAGACTAAAAAAAGTGGTAAACCTGGGCCATTCTTGCTGTCTGGATCCAGAGACAAGACTATT
AAGATGTGGGATGTCAGTACTGGCATGTGCCTTATGACCCTCGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCA
TTCTGGGGGGAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTACGCGTATGGGATTACAAGAACAAGCGATGCATGA
AGACCCTCAATGCGCATGAACACTTTGTTACCTCCTTGGATTTCCACAAGACGGCACCCTATGTCGTCACTGGCAGCGTA
GATCAAACAGTAAAAGTGTGGGAGTGCCGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 150 .81 RPM |
| bodymap2_adrenal | 169 .02 RPM |
| bodymap2_brain | 472 .55 RPM |
| bodymap2_breast | 189 .26 RPM |
| bodymap2_colon | 181 .56 RPM |
| bodymap2_heart | 203 .16 RPM |
| bodymap2_kidney | 191 .62 RPM |
| bodymap2_liver | 54 .77 RPM |
| bodymap2_lung | 133 .00 RPM |
| bodymap2_lymph_node | 136 .52 RPM |
| bodymap2_ovary | 238 .63 RPM |
| bodymap2_prostate | 180 .61 RPM |
| bodymap2_skeletal_muscle | 232 .75 RPM |
| bodymap2_testis | 270 .64 RPM |
| bodymap2_thyroid | 335 .70 RPM |
| bodymap2_white_blood_cells | 254 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000122692 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000196363 | other_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010776 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000020745 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007796 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008551 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000002826 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2144 | 85.58 | 76.10 | Please wait, loading  |
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| 2. | retro_hsap_2292 | 84.21 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSG00000007168 retrocopies