Parental gene:

ENSFCAG00000025737

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B1:18838514..18859777(+)


>ENSFCAG00000025737
ATGGCCGAATACTCCTATGTGAAGTCCACCAAACTCGTGCTCAAGGGAACCAAGGCTAAGAGTAAGAAGAAAAAGAGCAA
AGAGAAGAAGAGAAAAAGAGAAGAAGATGAAGAAACTCAGCTTGATATTGTTGGAATCTGGTGGACAGTAACAAACTTTG
GTGAAATTTCAGGAACCATAGCAATTGAAATGGATAAAGGAACCTATATACACGCACTTGACAATGGACTTTTTACACTG
GGAGCTCCACATAAAGAAGTTGATGAGGGCCCTAGTCCTCCAGAGCAGTTTACAGCTGTCAAATTGTCTGATTCCAGAAT
TGCCCTGAAATCTGGCTATGGAAAATACCTTGGTATTAATTCAGATGGACTTGTTGTGGGGCGTTCGGATGCAATTGGAC
CAAGAGAACAATGGGAACCAGTCTTTCAAGATGGGAAAATGGCCCTATTGGCCTCAAATAGCTGTTTTATTAGATGCAAC
GAAGCAGGTGATATAGAAGCGAAAAGTAAAACAGCAGGAGAAGAAGAAATGATAAAGATTAGATCCTGTGCTGAAAGAGA
AACTAAGAAAAAAGATGATATTCCAGAAGAAGACAAAGGAAATGTTAAACAGTGTGAAATCAATTATGTAAAGAAATTTC
AGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAGACAGTAAAATTCTCAAAAAGGCCCGGAAGGATGGATTTTTA
CATGAAACACTTCTGGACAGGAGAGCCAAATTGAAGGCTGATAGATACTGCAAATGA

Library Parental gene expression (RPM)
SRP017611_brain 7 .12 RPM
SRP017611_kidney 16 .39 RPM
SRP017611_liver 8 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013503 ortholog_one2many 1 retrogene
retro_amel_1609,
Canis familiaris ENSCAFG00000007135 ortholog_one2many 1 retrogene
retro_cfam_718,
Cavia porcellus ENSCPOG00000022277 possible_ortholog 7 retrogenes
retro_cpor_1349, retro_cpor_1350, retro_cpor_1359, retro_cpor_1361, retro_cpor_1362, retro_cpor_1363, retro_cpor_864,
Myotis lucifugus ENSMLUG00000023179 ortholog_one2many 2 retrogenes
retro_mluc_1185, retro_mluc_1490,
Otolemur garnettii ENSOGAG00000005749 possible_ortholog 2 retrogenes
retro_ogar_1523, retro_ogar_2535,
Pan troglodytes ENSPTRG00000016671 possible_ortholog 1 retrogene
retro_ptro_2930,
Rattus norvegicus ENSRNOG00000009846 possible_ortholog 1 retrogene
retro_rnor_88,
Sorex araneus ENSSARG00000002471 ortholog_one2many 1 retrogene
retro_sara_368,
Tupaia belangeri ENSTBEG00000014491 possible_ortholog 2 retrogenes
retro_tbel_1202, retro_tbel_3435,
Tarsius syrichta ENSTSYG00000010985 possible_ortholog 2 retrogenes
retro_tsyr_1347, retro_tsyr_1778,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_464 87.35 63.95
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Download FASTA sequences of all ENSFCAG00000025737 retrocopies