Parental gene:

HADH, ENSFCAG00000022260

Aliases:None
Description:hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:4799]
Organism:Cat (Felis catus)
Coordinates:B1:115207360..115257817(-)


>ENSFCAG00000022260
ATGGCTTTCGTAACCCGGCAGTTCGTGCGCTCTGTGTCCTCCTCATCCACTGCCTCAGCCTCGGCGAAGAAAATCATCAT
CAAGCACGTGACGGTTATCGGAGGTGGGCTAATGGGCGCCGGCATCGCCCAGGTTGCTGCAGCAACTGGCCACACGGTAA
TGTTGGTGGACCAGACAGAGGACATACTAGCAAAATCTAGAAAGGGGATTGAGGAAAGCCTTAGGAAAGTGGCCAAGAAG
AAGTTTGCAGAAAACCCCAAGGCGGGTGATGAATTTGTGGAGAAGACCCTGAACAGCATATCAACCAGCACGGATGCAGC
ATCTGTGGTCCACAGCACAGACCTGGTGGTGGAGGCCATCGTGGAAAACCTGAAGATGAAGAACGAGCTCTTCAAGAGGC
TGGACAAGTTTGCCTCTGAACACACAATCTTTGCCAGCAACACTTCCTCTCTGCACATCACAGACATAGCCAATGCCACC
ACAAGACAGGACCGATTCGCCGGGCTCCATTTCTTCAACCCAGTGCCCATGATGAAGCTTGTGGAGGTCATAAAGACACC
AATGACCAGCCAGAAGACAACTGAATCTCTGATAGACTTCAGCAAAGCCCTGGGAAAGCATCCTGTTTCTTGTAAGGACA
CTCCTGGGTTCATTGTGAACCGTCTCCTGGTGCCATACCTCATGGAAGCGATCAGGCTGCATGAACGAGGTGATGCATCC
AAGGAAGACATCGACACTGCGATGAAGCTGGGGGCTGGGTACCCTATGGGCCCATTTGAGCTTCTTGATTACGTGGGCCT
GGATACTGTGAAGTTCATCATTGACGGGTGGCATGAAGTGGATGCAAAGAACCCCTTGTTTCAGCCCAGCCCATCCTTGA
ATAAGCTGGTAGCTGAGAACAAGGTTGGCAAGAAGACCGGAGAAGGGTATTACAAATACAAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 23 .18 RPM
SRP017611_kidney 1478 .36 RPM
SRP017611_liver 237 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002049 ortholog_one2one 2 retrogenes
retro_btau_1111, retro_btau_1685,
Callithrix jacchus ENSCJAG00000015938 ortholog_one2one 1 retrogene
retro_cjac_772,
Echinops telfairi ENSETEG00000013807 ortholog_one2one 1 retrogene
retro_etel_1694,
Homo sapiens ENSG00000138796 ortholog_one2one 1 retrogene
retro_hsap_1571,
Gorilla gorilla ENSGGOG00000004423 ortholog_one2one 1 retrogene
retro_ggor_1196,
Macaca mulatta ENSMMUG00000023254 ortholog_one2one 1 retrogene
retro_mmul_2217,
Nomascus leucogenys ENSNLEG00000012951 ortholog_one2one 1 retrogene
retro_nleu_1738,
Pongo abelii ENSPPYG00000014986 ortholog_one2one 1 retrogene
retro_pabe_1296,
Pan troglodytes ENSPTRG00000016351 ortholog_one2one 1 retrogene
retro_ptro_1058,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1225 72.15 100.00
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Download FASTA sequences of all ENSFCAG00000022260 retrocopies