Parental gene:

THUMPD1, ENSFCAG00000015158

Aliases:None
Description:THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807]
Organism:Cat (Felis catus)
Coordinates:E3:26730615..26735229(+)


>ENSFCAG00000015158
ATGGCGGCCCCCGTCCAGCAGCCTCCTCAGTCTAGCGGTGGAAAGCGCAAAGGGAAAGCTCAGTATGTGCAGGCCAAGCG
GGCGCGGCGCTGCGACGGCGGGGGGCCACGGCAGCTGGAACCCGGGCTACAGGGCATTCTCATTACCTGCAACATGAACG
AGCGCAAGTGCGTGGAGGAGGCCTACAGTCTGCTCAACGAATACGGCGACGACATGTACGGGCCGGAAAAGTTTACAGAC
AAAGATCAGCAGCCCTCTGGAAGTGAGGGAGAAGATGATGATATGGAGGCTGCCTTGAAGAAAGAAGTTGGTGACATTAA
AGCATCTACGGAGATGAAGCTAAGAAGATTCCAATCAGTGGAGAGTGGAGCAAATAACGTAGTCTTCATCAGGACACTTG
GGATAGAACCTGAGAAATTGGTACATCATATTCTTCAGGATATGTATAAAACCAAGAAGAAGAAGACTCGGGTTATTCTA
CGAATGTTACCTATTTCGGGCACATGCAAGGCTTTCTTAGAAGACATGAAAAAATATGCAGAAACATTTTTGGCACCCTG
GTTTAAAGCTCCAAACAAAGGGACATTTCAGATTGTATATAAATCTCGAAATAACAGCCACATGAATAGAGAAGAAGTTA
TCAAAGAATTGGCAGGAATAGTAGGCAGCCTCAATTCGGAAAATAAAGTGGATCTTACCAATCCACAGTACACAGTGGTA
GTAGAAATCATTAAAGCTGTCTGTTGCCTGAGTGTTGTGACAGATTACATGTTGTTCAGAAAGTATAATCTCCAGGAGGT
GGTTAAGAGTGCTAAGGACCCATCACAGCTTAACCCAAAGCAGCCAGCACAAGCAGGAAATGGGAAAGAAGCTAAATTGG
AATCTGGTGACAAATCAAATCAAAATGAGCCAGCAGAAGGAAAAAATAACCAGCAAGTGGTACCAGAAAATAATGAGGAG
CTGGGGCACACAAAACCAAGATCT

Library Parental gene expression (RPM)
SRP017611_brain 9 .07 RPM
SRP017611_kidney 4 .53 RPM
SRP017611_liver 3 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009499 ortholog_one2many 1 retrogene
retro_cjac_915,
Cavia porcellus ENSCPOG00000008919 ortholog_one2many 1 retrogene
retro_cpor_71,
Homo sapiens ENSG00000066654 ortholog_one2one 1 retrogene
retro_hsap_2521,
Gorilla gorilla ENSGGOG00000005231 ortholog_one2one 1 retrogene
retro_ggor_1573,
Macaca mulatta ENSMMUG00000004225 ortholog_one2many 1 retrogene
retro_mmul_1599,
Monodelphis domestica ENSMODG00000006971 ortholog_one2many 1 retrogene
retro_mdom_54,
Nomascus leucogenys ENSNLEG00000012369 ortholog_one2one 1 retrogene
retro_nleu_1443,
Pan troglodytes ENSPTRG00000007848 ortholog_one2one 1 retrogene
retro_ptro_1466,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_195 91.63 76.22
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Download FASTA sequences of all ENSFCAG00000015158 retrocopies