Parental gene:

RAC1, ENSFCAG00000011361

Aliases:None
Description:ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) [Source:HGNC Symbol;Acc:9801]
Organism:Cat (Felis catus)
Coordinates:E3:4685054..4697126(-)


>ENSFCAG00000011361
TTTCAGGATAGAAAATGTGTAGGCTTCAGTAGAAGAGCCGTAGGTAAAACGTGCCTACTGATCAGTTACACAACCAATGC
ATTTCCTGGAGAATATATCCCCACTGTCTTTGACAACTACTCTGCCAATGTTATGGTGGATGGAAAACCGGTGAATCTGG
GCTTATGGGATACAGCTGGACAAGAAGATTATGACAGATTACGTCCCTTATCCTATCCGCAAACAGTTGGAGAAACGTAT
GGTAAGGATATAACCTCCAGGGGCAAAGACAAGCCGATTGCCGATGTATTCTTAATTTGCTTTTCTCTTGTGAGTCCTGC
GTCATTTGAAAATGTTCGAGCAAAGTGGTACCCTGAAGTGCGACACCACTGTCCCAACACCCCCATCATCTTGGTGGGAA
CTAAACTTGACCTCAGGGACGACAAAGACACGATTGAGAAACTGAAGGAGAAAAAGCTGACTCCCATCACCTACCCGCAG
GGGTTGGCCATGGCGAAGGAGATCGGTGCTGTAAAATACCTGGAGTGCTCGGCGCTCACGCAGCGAGGCCTCAAGACAGT
GTTTGATGAAGCTATTCGAGCGGTTCTCTGCCCCCCTCCCGTCAAGAAGAGGAAGAGAAAATGCCTGCTGTTGTAA

Library Parental gene expression (RPM)
SRP017611_brain 92 .74 RPM
SRP017611_kidney 32 .57 RPM
SRP017611_liver 27 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000004853 other_paralog 4 retrogenes
retro_fcat_129, retro_fcat_1421, retro_fcat_1579, retro_fcat_896,
Felis catus ENSFCAG00000011671 within_species_paralog 1 retrogene
retro_fcat_431,
Felis catus ENSFCAG00000015608 other_paralog 1 retrogene
retro_fcat_795,
Felis catus ENSFCAG00000025776 within_species_paralog 2 retrogenes
retro_fcat_1064, retro_fcat_826,
Gorilla gorilla ENSGGOG00000026733 possible_ortholog 2 retrogenes
retro_ggor_2110, retro_ggor_217,
Loxodonta africana ENSLAFG00000012844 ortholog_one2one 1 retrogene
retro_lafr_818,
Myotis lucifugus ENSMLUG00000009701 ortholog_one2one 1 retrogene
retro_mluc_1059,
Pan troglodytes ENSPTRG00000018910 possible_ortholog 4 retrogenes
retro_ptro_1288, retro_ptro_3044, retro_ptro_3274, retro_ptro_36,
Tupaia belangeri ENSTBEG00000007272 possible_ortholog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,
Xenopus tropicalis ENSXETG00000027593 ortholog_one2one 1 retrogene
retro_xtro_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_717 76.58 51.18
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2. retro_fcat_1632 73.45 53.08
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Download FASTA sequences of all ENSFCAG00000011361 retrocopies