Parental gene:

ENSFCAG00000010302

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:D4:88038517..88042290(-)


>ENSFCAG00000010302
TCGGCTCGGAGGAGGCGACGGTGCAACGCTCTTCGGTCGTCCCGAATCCGGGTTCATCCGACACCAACCGCCTCCACCAT
GCCGCCTAAGTTCGACCCCAACGAGATCAAAGTCGAGTACCTGAGGTGCACCGGTGGTGAGGTCGGTGCTACGTCTGCCC
TGGCCCCCAAGATCGGCCCGCTTGGTCTGTCTCCAAAAAAGGTTGGTGATGACATCGCCAAGGCAACCGGTGATTGGAAG
GGTCTGAGGATTACAGTGAAGCTGACCATTCAGAACAGACAGGCTCAGATTGAAGTGGTACCTTCTGCCTCCGCCCTGAT
TATCAAAGCCCTAAAGGAACCGCCAAGGGACAGAAAGAAGCAGAAAAACATTAAGCACAGTGGAAACATCACTTTTGATG
AGATTGTCAACATTGCCCGACAGATGAGGCACCGATCGTTAGCCAGGGAACTCTCTGGAACCATTAAAGAGATTCTGGGG
ACCGCCCAATCTGTGGGCTGCAATGTTGATGGCCGCCACCCTCATGACATCATAGATGACATCAATAGTGGTGCAGTGGA
ATGTCCAGCTGTA

Library Parental gene expression (RPM)
SRP017611_brain 96 .18 RPM
SRP017611_kidney 388 .12 RPM
SRP017611_liver 219 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016712 ortholog_one2one 15 retrogenes
retro_amel_1131, retro_amel_1172, retro_amel_1208, retro_amel_1400, retro_amel_1508, retro_amel_1558, retro_amel_17, retro_amel_174, retro_amel_1856, retro_amel_203, retro_amel_260, retro_amel_293, retro_amel_688, retro_amel_876, retro_amel_952,
Canis familiaris ENSCAFG00000020136 ortholog_one2one 31 retrogenes
retro_cfam_1016, retro_cfam_1139, retro_cfam_1141, retro_cfam_1143, retro_cfam_1151, retro_cfam_1166, retro_cfam_1181, retro_cfam_1203, retro_cfam_1257, retro_cfam_1470, retro_cfam_1484, retro_cfam_1558, retro_cfam_1591, retro_cfam_1597, retro_cfam_1632, retro_cfam_1796, retro_cfam_1880, retro_cfam_1986, retro_cfam_2009, retro_cfam_2094, retro_cfam_2194, retro_cfam_437, retro_cfam_588, retro_cfam_706, retro_cfam_728, retro_cfam_748, retro_cfam_759, retro_cfam_76, retro_cfam_850, retro_cfam_950, retro_cfam_955,
Cavia porcellus ENSCPOG00000013769 ortholog_one2many 18 retrogenes
retro_cpor_1, retro_cpor_1069, retro_cpor_1108, retro_cpor_1373, retro_cpor_140, retro_cpor_1473, retro_cpor_1510, retro_cpor_1513, retro_cpor_1514, retro_cpor_313, retro_cpor_342, retro_cpor_553, retro_cpor_556, retro_cpor_664, retro_cpor_874, retro_cpor_910, retro_cpor_921, retro_cpor_954,
Equus caballus ENSECAG00000010622 ortholog_many2many 17 retrogenes
retro_ecab_1024, retro_ecab_1027, retro_ecab_1119, retro_ecab_157, retro_ecab_335, retro_ecab_379, retro_ecab_457, retro_ecab_475, retro_ecab_605, retro_ecab_666, retro_ecab_679, retro_ecab_699, retro_ecab_708, retro_ecab_843, retro_ecab_895, retro_ecab_967, retro_ecab_973,
Echinops telfairi ENSETEG00000006941 ortholog_one2many 7 retrogenes
retro_etel_1508, retro_etel_1714, retro_etel_318, retro_etel_345, retro_etel_750, retro_etel_919, retro_etel_983,
Latimeria chalumnae ENSLACG00000015373 ortholog_one2many 3 retrogenes
retro_lcha_31, retro_lcha_87, retro_lcha_92,
Macropus eugenii ENSMEUG00000007380 possible_ortholog 12 retrogenes
retro_meug_1102, retro_meug_1107, retro_meug_1199, retro_meug_1357, retro_meug_1426, retro_meug_1611, retro_meug_1634, retro_meug_1691, retro_meug_1953, retro_meug_265, retro_meug_479, retro_meug_493,
Myotis lucifugus ENSMLUG00000009551 ortholog_one2many 2 retrogenes
retro_mluc_1222, retro_mluc_1797,
Myotis lucifugus ENSMLUG00000013404 possible_ortholog 1 retrogene
retro_mluc_14,
Monodelphis domestica ENSMODG00000004571 possible_ortholog 9 retrogenes
retro_mdom_1061, retro_mdom_1177, retro_mdom_1192, retro_mdom_1526, retro_mdom_1719, retro_mdom_1871, retro_mdom_1947, retro_mdom_309, retro_mdom_925,
Mustela putorius furo ENSMPUG00000013832 ortholog_one2one 34 retrogenes
retro_mputfur_1102, retro_mputfur_1104, retro_mputfur_1137, retro_mputfur_1192, retro_mputfur_1223, retro_mputfur_1283, retro_mputfur_1329, retro_mputfur_1467, retro_mputfur_1526, retro_mputfur_1580, retro_mputfur_260, retro_mputfur_331, retro_mputfur_363, retro_mputfur_445, retro_mputfur_489, retro_mputfur_500, retro_mputfur_508, retro_mputfur_521, retro_mputfur_533, retro_mputfur_534, retro_mputfur_544, retro_mputfur_559, retro_mputfur_594, retro_mputfur_61, retro_mputfur_622, retro_mputfur_632, retro_mputfur_651, retro_mputfur_824, retro_mputfur_828, retro_mputfur_843, retro_mputfur_868, retro_mputfur_884, retro_mputfur_913, retro_mputfur_977,
Otolemur garnettii ENSOGAG00000000597 possible_ortholog 120 retrogenes
retro_ogar_1002, retro_ogar_1010, retro_ogar_1049, retro_ogar_1069, retro_ogar_1106, retro_ogar_1117, retro_ogar_1137, retro_ogar_1140, retro_ogar_1181, retro_ogar_1188, retro_ogar_1189, retro_ogar_1192, retro_ogar_1230, retro_ogar_1247, retro_ogar_1263, retro_ogar_1295, retro_ogar_1331, retro_ogar_1341, retro_ogar_1408, retro_ogar_1409, retro_ogar_1427, retro_ogar_1457, retro_ogar_1464, retro_ogar_1489, retro_ogar_1503, retro_ogar_1534, retro_ogar_1536, retro_ogar_1550, retro_ogar_1569, retro_ogar_1570, retro_ogar_1579, retro_ogar_1606, retro_ogar_1621, retro_ogar_1709, retro_ogar_1717, retro_ogar_1739, retro_ogar_1789, retro_ogar_1803, retro_ogar_1810, retro_ogar_1825, retro_ogar_1836, retro_ogar_1881, retro_ogar_1885, retro_ogar_1916, retro_ogar_1923, retro_ogar_1937, retro_ogar_1941, retro_ogar_1948, retro_ogar_1969, retro_ogar_1975, retro_ogar_1987, retro_ogar_2055, retro_ogar_2115, retro_ogar_2134, retro_ogar_2172, retro_ogar_2179, retro_ogar_2180, retro_ogar_2208, retro_ogar_2209, retro_ogar_2230, retro_ogar_2291, retro_ogar_2323, retro_ogar_2387, retro_ogar_2483, retro_ogar_2495, retro_ogar_2511, retro_ogar_2570, retro_ogar_2620, retro_ogar_2622, retro_ogar_2624, retro_ogar_2749, retro_ogar_2768, retro_ogar_2809, retro_ogar_2904, retro_ogar_2935, retro_ogar_2945, retro_ogar_2953, retro_ogar_2980, retro_ogar_3004, retro_ogar_3017, retro_ogar_303, retro_ogar_3035, retro_ogar_3128, retro_ogar_3135, retro_ogar_3164, retro_ogar_3394, retro_ogar_3489, retro_ogar_395, retro_ogar_398, retro_ogar_412, retro_ogar_427, retro_ogar_452, retro_ogar_480, retro_ogar_512, retro_ogar_513, retro_ogar_538, retro_ogar_560, retro_ogar_587, retro_ogar_624, retro_ogar_636, retro_ogar_653, retro_ogar_655, retro_ogar_667, retro_ogar_668, retro_ogar_669, retro_ogar_683, retro_ogar_700, retro_ogar_734, retro_ogar_737, retro_ogar_744, retro_ogar_747, retro_ogar_775, retro_ogar_818, retro_ogar_853, retro_ogar_868, retro_ogar_901, retro_ogar_927, retro_ogar_956, retro_ogar_962, retro_ogar_964,
Rattus norvegicus ENSRNOG00000016220 possible_ortholog 4 retrogenes
retro_rnor_166, retro_rnor_236, retro_rnor_247, retro_rnor_312,
Sarcophilus harrisii ENSSHAG00000017864 possible_ortholog 8 retrogenes
retro_shar_140, retro_shar_266, retro_shar_284, retro_shar_335, retro_shar_346, retro_shar_453, retro_shar_508, retro_shar_646,
Ictidomys tridecemlineatus ENSSTOG00000027425 ortholog_one2many 7 retrogenes
retro_itri_1128, retro_itri_1197, retro_itri_1498, retro_itri_445, retro_itri_790, retro_itri_833, retro_itri_840,
Tupaia belangeri ENSTBEG00000006304 possible_ortholog 25 retrogenes
retro_tbel_1270, retro_tbel_1487, retro_tbel_2032, retro_tbel_207, retro_tbel_2110, retro_tbel_2210, retro_tbel_2815, retro_tbel_2816, retro_tbel_2886, retro_tbel_2894, retro_tbel_3506, retro_tbel_358, retro_tbel_3702, retro_tbel_3725, retro_tbel_3911, retro_tbel_3972, retro_tbel_3973, retro_tbel_400, retro_tbel_4089, retro_tbel_4231, retro_tbel_4647, retro_tbel_4679, retro_tbel_560, retro_tbel_742, retro_tbel_754,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_35 75.86 60.73
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_53 82.93 85.86
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_fcat_302 66.00 51.31
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_fcat_352 75.57 90.58
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_fcat_359 74.85 85.86
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_fcat_415 55.49 86.91
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_fcat_455 62.84 94.76
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_fcat_502 64.38 75.39
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_fcat_509 71.05 98.95
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_fcat_638 75.51 50.26
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_fcat_767 72.02 98.95
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_fcat_819 69.47 98.43
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_fcat_902 73.54 98.95
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_fcat_1078 75.66 97.91
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_fcat_1115 73.85 99.48
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_fcat_1118 84.03 61.26
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_fcat_1149 70.54 67.54
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_fcat_1206 72.38 53.40
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_fcat_1276 82.35 52.88
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_fcat_1288 69.94 90.05
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_fcat_1298 70.25 62.30
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_fcat_1376 96.61 61.26
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_fcat_1482 71.35 99.48
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_fcat_1527 65.57 94.24
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_fcat_1637 80.26 79.06
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_fcat_1638 78.79 68.59
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_fcat_1676 58.06 96.34
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_fcat_1854 51.35 56.54
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_fcat_1873 74.44 92.15
Please wait, loading
Please wait, loading
Please wait, loading
30. retro_fcat_1977 77.38 86.91
Please wait, loading
Please wait, loading
Please wait, loading
31. retro_fcat_2009 66.92 67.54
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000010302 retrocopies