Parental gene:

RPL12, ENSOGAG00000000597

Aliases:None
Description:ribosomal protein L12 [Source:HGNC Symbol;Acc:10302]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873533.1:30170677..30175259(-)


>ENSOGAG00000000597
ATGCCGCCTAAGTTCGACCCCAACGAGATCAAAGTCGTATACCTGAGGTGCACCGGCGGCGAAGTCGGTGCCACGTCTGC
CCTGGCCCCCAAGATCGGCCCTCTGGGTTTGTCTCCAAAAAAGGTTGGTGATGACATCGCCAAAGCAACTGGTGACTGGA
AGGGTCTGAGGATTACAGTGAAACTGACTATCCAGAACAGACAGGCCCAGATTGAAGTGGTACCTTCTGCCTCAGCCCTC
ATCATCAAAGCCCTCAAGGAACCACCAAGAGACAGAAAGAAACAGAAAAACATTAAACACAATGGAAATATCACTTTTGA
TGAGATTGTCAACATTGCCAGACAGATGCGGCACCGATCTTTAGCCAGAGAACTCTCTGGAACCATTAAAGAGATCCTGG
GGACAGCCCAGTCTGTGGGCTGCAATGTTGATGGCCGCCACCCTCATGACATCATAGATGACATCAATAGTGGTGCTGTG
GAATGCCCAGCTGTA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016712 possible_ortholog 15 retrogenes
retro_amel_1131, retro_amel_1172, retro_amel_1208, retro_amel_1400, retro_amel_1508, retro_amel_1558, retro_amel_17, retro_amel_174, retro_amel_1856, retro_amel_203, retro_amel_260, retro_amel_293, retro_amel_688, retro_amel_876, retro_amel_952,
Bos taurus ENSBTAG00000006963 possible_ortholog 3 retrogenes
retro_btau_102, retro_btau_2, retro_btau_5,
Canis familiaris ENSCAFG00000020136 possible_ortholog 31 retrogenes
retro_cfam_1016, retro_cfam_1139, retro_cfam_1141, retro_cfam_1143, retro_cfam_1151, retro_cfam_1166, retro_cfam_1181, retro_cfam_1203, retro_cfam_1257, retro_cfam_1470, retro_cfam_1484, retro_cfam_1558, retro_cfam_1591, retro_cfam_1597, retro_cfam_1632, retro_cfam_1796, retro_cfam_1880, retro_cfam_1986, retro_cfam_2009, retro_cfam_2094, retro_cfam_2194, retro_cfam_437, retro_cfam_588, retro_cfam_706, retro_cfam_728, retro_cfam_748, retro_cfam_759, retro_cfam_76, retro_cfam_850, retro_cfam_950, retro_cfam_955,
Callithrix jacchus ENSCJAG00000018082 possible_ortholog 1 retrogene
retro_cjac_221,
Cavia porcellus ENSCPOG00000013769 possible_ortholog 18 retrogenes
retro_cpor_1, retro_cpor_1069, retro_cpor_1108, retro_cpor_1373, retro_cpor_140, retro_cpor_1473, retro_cpor_1510, retro_cpor_1513, retro_cpor_1514, retro_cpor_313, retro_cpor_342, retro_cpor_553, retro_cpor_556, retro_cpor_664, retro_cpor_874, retro_cpor_910, retro_cpor_921, retro_cpor_954,
Equus caballus ENSECAG00000010622 possible_ortholog 17 retrogenes
retro_ecab_1024, retro_ecab_1027, retro_ecab_1119, retro_ecab_157, retro_ecab_335, retro_ecab_379, retro_ecab_457, retro_ecab_475, retro_ecab_605, retro_ecab_666, retro_ecab_679, retro_ecab_699, retro_ecab_708, retro_ecab_843, retro_ecab_895, retro_ecab_967, retro_ecab_973,
Echinops telfairi ENSETEG00000006941 possible_ortholog 7 retrogenes
retro_etel_1508, retro_etel_1714, retro_etel_318, retro_etel_345, retro_etel_750, retro_etel_919, retro_etel_983,
Felis catus ENSFCAG00000010302 possible_ortholog 31 retrogenes
retro_fcat_1078, retro_fcat_1115, retro_fcat_1118, retro_fcat_1149, retro_fcat_1206, retro_fcat_1276, retro_fcat_1288, retro_fcat_1298, retro_fcat_1376, retro_fcat_1482, retro_fcat_1527, retro_fcat_1637, retro_fcat_1638, retro_fcat_1676, retro_fcat_1854, retro_fcat_1873, retro_fcat_1977, retro_fcat_2009, retro_fcat_302, retro_fcat_35, retro_fcat_352, retro_fcat_359, retro_fcat_415, retro_fcat_455, retro_fcat_502, retro_fcat_509, retro_fcat_53, retro_fcat_638, retro_fcat_767, retro_fcat_819, retro_fcat_902,
Gorilla gorilla ENSGGOG00000000648 possible_ortholog 34 retrogenes
retro_ggor_1024, retro_ggor_1059, retro_ggor_1086, retro_ggor_1207, retro_ggor_1242, retro_ggor_1377, retro_ggor_1389, retro_ggor_1449, retro_ggor_1511, retro_ggor_1516, retro_ggor_1530, retro_ggor_1645, retro_ggor_1740, retro_ggor_1753, retro_ggor_1806, retro_ggor_1845, retro_ggor_2158, retro_ggor_221, retro_ggor_2232, retro_ggor_2293, retro_ggor_2304, retro_ggor_232, retro_ggor_2334, retro_ggor_2394, retro_ggor_2414, retro_ggor_2506, retro_ggor_262, retro_ggor_2758, retro_ggor_2768, retro_ggor_2949, retro_ggor_541, retro_ggor_600, retro_ggor_637, retro_ggor_942,
Latimeria chalumnae ENSLACG00000015373 ortholog_one2one 3 retrogenes
retro_lcha_31, retro_lcha_87, retro_lcha_92,
Loxodonta africana ENSLAFG00000017669 possible_ortholog 10 retrogenes
retro_lafr_1, retro_lafr_193, retro_lafr_204, retro_lafr_286, retro_lafr_342, retro_lafr_41, retro_lafr_8, retro_lafr_802, retro_lafr_830, retro_lafr_984,
Macropus eugenii ENSMEUG00000007380 possible_ortholog 12 retrogenes
retro_meug_1102, retro_meug_1107, retro_meug_1199, retro_meug_1357, retro_meug_1426, retro_meug_1611, retro_meug_1634, retro_meug_1691, retro_meug_1953, retro_meug_265, retro_meug_479, retro_meug_493,
Myotis lucifugus ENSMLUG00000009551 possible_ortholog 2 retrogenes
retro_mluc_1222, retro_mluc_1797,
Myotis lucifugus ENSMLUG00000013404 possible_ortholog 1 retrogene
retro_mluc_14,
Macaca mulatta ENSMMUG00000000422 possible_ortholog 2 retrogenes
retro_mmul_1823, retro_mmul_53,
Monodelphis domestica ENSMODG00000004571 possible_ortholog 9 retrogenes
retro_mdom_1061, retro_mdom_1177, retro_mdom_1192, retro_mdom_1526, retro_mdom_1719, retro_mdom_1871, retro_mdom_1947, retro_mdom_309, retro_mdom_925,
Mustela putorius furo ENSMPUG00000013832 possible_ortholog 34 retrogenes
retro_mputfur_1102, retro_mputfur_1104, retro_mputfur_1137, retro_mputfur_1192, retro_mputfur_1223, retro_mputfur_1283, retro_mputfur_1329, retro_mputfur_1467, retro_mputfur_1526, retro_mputfur_1580, retro_mputfur_260, retro_mputfur_331, retro_mputfur_363, retro_mputfur_445, retro_mputfur_489, retro_mputfur_500, retro_mputfur_508, retro_mputfur_521, retro_mputfur_533, retro_mputfur_534, retro_mputfur_544, retro_mputfur_559, retro_mputfur_594, retro_mputfur_61, retro_mputfur_622, retro_mputfur_632, retro_mputfur_651, retro_mputfur_824, retro_mputfur_828, retro_mputfur_843, retro_mputfur_868, retro_mputfur_884, retro_mputfur_913, retro_mputfur_977,
Mus musculus ENSMUSG00000038900 possible_ortholog 1 retrogene
retro_mmus_28,
Oryctolagus cuniculus ENSOCUG00000004902 possible_ortholog 9 retrogenes
retro_ocun_1246, retro_ocun_1632, retro_ocun_1895, retro_ocun_318, retro_ocun_329, retro_ocun_520, retro_ocun_556, retro_ocun_677, retro_ocun_880,
Ochotona princeps ENSOPRG00000011078 possible_ortholog 21 retrogenes
retro_opri_100, retro_opri_1018, retro_opri_1066, retro_opri_1110, retro_opri_1210, retro_opri_1217, retro_opri_221, retro_opri_265, retro_opri_336, retro_opri_353, retro_opri_418, retro_opri_461, retro_opri_479, retro_opri_576, retro_opri_638, retro_opri_648, retro_opri_658, retro_opri_672, retro_opri_835, retro_opri_905, retro_opri_986,
Pongo abelii ENSPPYG00000019622 possible_ortholog 44 retrogenes
retro_pabe_1009, retro_pabe_1084, retro_pabe_1095, retro_pabe_1127, retro_pabe_1159, retro_pabe_1223, retro_pabe_1246, retro_pabe_1309, retro_pabe_1361, retro_pabe_1471, retro_pabe_1509, retro_pabe_1577, retro_pabe_1659, retro_pabe_1660, retro_pabe_1736, retro_pabe_1794, retro_pabe_1806, retro_pabe_1820, retro_pabe_1969, retro_pabe_1982, retro_pabe_2000, retro_pabe_2149, retro_pabe_2328, retro_pabe_2531, retro_pabe_2802, retro_pabe_2859, retro_pabe_2928, retro_pabe_2947, retro_pabe_3002, retro_pabe_3146, retro_pabe_3185, retro_pabe_3276, retro_pabe_3363, retro_pabe_3405, retro_pabe_3482, retro_pabe_3693, retro_pabe_488, retro_pabe_521, retro_pabe_604, retro_pabe_620, retro_pabe_757, retro_pabe_815, retro_pabe_831, retro_pabe_904,
Pan troglodytes ENSPTRG00000022808 possible_ortholog 1 retrogene
retro_ptro_21,
Rattus norvegicus ENSRNOG00000016220 ortholog_one2many 4 retrogenes
retro_rnor_166, retro_rnor_236, retro_rnor_247, retro_rnor_312,
Sus scrofa ENSSSCG00000005612 possible_ortholog 14 retrogenes
retro_sscr_1111, retro_sscr_127, retro_sscr_189, retro_sscr_28, retro_sscr_439, retro_sscr_526, retro_sscr_551, retro_sscr_71, retro_sscr_715, retro_sscr_772, retro_sscr_773, retro_sscr_828, retro_sscr_832, retro_sscr_911,
Tupaia belangeri ENSTBEG00000006304 possible_ortholog 25 retrogenes
retro_tbel_1270, retro_tbel_1487, retro_tbel_2032, retro_tbel_207, retro_tbel_2110, retro_tbel_2210, retro_tbel_2815, retro_tbel_2816, retro_tbel_2886, retro_tbel_2894, retro_tbel_3506, retro_tbel_358, retro_tbel_3702, retro_tbel_3725, retro_tbel_3911, retro_tbel_3972, retro_tbel_3973, retro_tbel_400, retro_tbel_4089, retro_tbel_4231, retro_tbel_4647, retro_tbel_4679, retro_tbel_560, retro_tbel_742, retro_tbel_754,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_303 74.44 80.00
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2. retro_ogar_395 57.14 63.64
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3. retro_ogar_398 83.73 99.39
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4. retro_ogar_412 80.98 97.58
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5. retro_ogar_427 78.85 62.42
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6. retro_ogar_452 74.44 80.61
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7. retro_ogar_480 80.98 98.79
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8. retro_ogar_512 81.58 69.09
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9. retro_ogar_513 76.83 98.18
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10. retro_ogar_538 61.70 54.55
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11. retro_ogar_560 72.37 90.91
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12. retro_ogar_587 83.03 99.39
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13. retro_ogar_624 60.82 58.18
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14. retro_ogar_636 74.70 99.39
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15. retro_ogar_653 76.54 97.58
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16. retro_ogar_655 88.43 73.33
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17. retro_ogar_667 71.82 66.06
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18. retro_ogar_668 86.87 60.00
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19. retro_ogar_669 82.21 98.18
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20. retro_ogar_683 57.00 59.39
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21. retro_ogar_700 74.42 51.52
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22. retro_ogar_734 66.67 99.39
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23. retro_ogar_737 79.81 62.42
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24. retro_ogar_744 66.67 92.73
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25. retro_ogar_747 84.09 52.12
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26. retro_ogar_775 72.19 99.39
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27. retro_ogar_818 84.42 92.73
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28. retro_ogar_853 67.31 61.82
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29. retro_ogar_868 83.33 61.82
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30. retro_ogar_901 80.69 86.67
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31. retro_ogar_927 68.26 99.39
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32. retro_ogar_956 68.75 56.97
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33. retro_ogar_962 81.58 91.52
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34. retro_ogar_964 72.41 52.12
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35. retro_ogar_1002 74.17 88.48
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36. retro_ogar_1010 83.84 60.00
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37. retro_ogar_1049 84.56 82.42
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38. retro_ogar_1069 74.48 84.85
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39. retro_ogar_1106 83.22 89.70
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40. retro_ogar_1117 75.00 65.45
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41. retro_ogar_1137 75.22 67.27
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42. retro_ogar_1140 83.44 98.18
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43. retro_ogar_1181 81.00 60.00
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44. retro_ogar_1188 73.65 98.18
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45. retro_ogar_1189 73.65 99.39
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46. retro_ogar_1192 84.85 99.39
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47. retro_ogar_1230 77.32 57.58
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48. retro_ogar_1247 95.73 99.39
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49. retro_ogar_1263 80.00 63.03
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50. retro_ogar_1295 70.23 79.39
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51. retro_ogar_1331 72.87 77.58
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52. retro_ogar_1341 73.58 63.03
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53. retro_ogar_1408 87.95 98.79
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54. retro_ogar_1409 77.17 75.76
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55. retro_ogar_1427 75.19 80.00
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56. retro_ogar_1457 83.54 99.39
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57. retro_ogar_1464 88.71 74.55
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58. retro_ogar_1489 58.68 98.18
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59. retro_ogar_1503 82.11 57.58
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60. retro_ogar_1534 69.44 64.85
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61. retro_ogar_1536 57.06 96.97
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62. retro_ogar_1550 72.73 99.39
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63. retro_ogar_1569 75.71 84.24
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64. retro_ogar_1570 76.34 56.36
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65. retro_ogar_1579 74.00 60.61
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66. retro_ogar_1606 87.05 83.64
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67. retro_ogar_1621 81.82 60.00
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68. retro_ogar_1709 71.30 64.85
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69. retro_ogar_1717 79.79 56.97
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70. retro_ogar_1739 80.18 67.27
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71. retro_ogar_1789 70.10 57.58
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72. retro_ogar_1803 84.85 99.39
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73. retro_ogar_1810 78.91 87.88
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74. retro_ogar_1825 78.57 91.52
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75. retro_ogar_1836 50.51 58.18
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76. retro_ogar_1881 80.00 50.91
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77. retro_ogar_1885 80.54 89.09
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78. retro_ogar_1916 83.56 87.27
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79. retro_ogar_1923 81.93 99.39
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80. retro_ogar_1937 76.58 66.67
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81. retro_ogar_1941 75.82 91.52
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82. retro_ogar_1948 75.00 73.94
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83. retro_ogar_1969 74.31 87.27
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84. retro_ogar_1975 77.89 57.58
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85. retro_ogar_1987 86.05 52.12
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86. retro_ogar_2055 69.66 53.33
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87. retro_ogar_2115 74.70 98.79
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88. retro_ogar_2134 83.87 56.36
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89. retro_ogar_2172 77.46 84.24
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90. retro_ogar_2179 79.27 99.39
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91. retro_ogar_2180 81.33 99.39
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92. retro_ogar_2208 68.32 60.61
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93. retro_ogar_2209 81.52 55.15
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94. retro_ogar_2230 72.39 97.58
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95. retro_ogar_2291 67.92 63.03
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96. retro_ogar_2323 81.60 98.79
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97. retro_ogar_2387 84.85 60.00
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98. retro_ogar_2483 83.13 99.39
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99. retro_ogar_2495 67.10 93.33
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100. retro_ogar_2511 54.55 51.52
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101. retro_ogar_2570 71.97 78.79
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102. retro_ogar_2620 73.78 97.58
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103. retro_ogar_2622 75.00 75.76
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104. retro_ogar_2624 73.03 89.70
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105. retro_ogar_2749 79.38 58.79
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106. retro_ogar_2768 69.89 55.15
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107. retro_ogar_2809 81.44 99.39
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108. retro_ogar_2904 78.57 99.39
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109. retro_ogar_2935 68.32 95.15
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110. retro_ogar_2945 80.75 96.36
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111. retro_ogar_2953 73.65 98.79
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112. retro_ogar_2980 80.37 95.76
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113. retro_ogar_3004 71.76 79.39
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114. retro_ogar_3017 84.38 57.58
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115. retro_ogar_3035 68.93 60.61
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116. retro_ogar_3128 71.26 52.12
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117. retro_ogar_3135 69.28 99.39
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118. retro_ogar_3164 78.10 62.42
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119. retro_ogar_3394 77.89 56.36
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120. retro_ogar_3489 83.80 86.06
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Download FASTA sequences of all ENSOGAG00000000597 retrocopies