Parental gene:

ENSETEG00000013571

Aliases:None
Description:None
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_2646:182189..185182(+)


>ENSETEG00000013571
ATGCCCAAGAGAAAGGCTGAAGGGGATGCTAAGGGAGATAAAGCCAAGGTGAAGGATGAACCTCAGAGGAGATCAGCAAG
GTTGTCTGCTAAACCTGCTCCTGCAAAACCAGAGCCCAAGCCGAAAAAGGCCCCTGCAAAGAAGGGAGAGAAGGTACCTA
AAGGGAAAAAGGGGAAAGCTGATGCTGGCAAGGACGGGAACAACCCTGCGGAAAATGGAGACGCCAAAACAGACCAGGCA
CAGAGAGCTGAAGGTGCTGGAGATGCCAAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038104 ortholog_one2one 7 retrogenes
retro_btau_1041, retro_btau_1160, retro_btau_1200, retro_btau_1292, retro_btau_1297, retro_btau_1684, retro_btau_482,
Canis familiaris ENSCAFG00000023168 ortholog_one2many 35 retrogenes
retro_cfam_1043, retro_cfam_1188, retro_cfam_1314, retro_cfam_1360, retro_cfam_1519, retro_cfam_1546, retro_cfam_1593, retro_cfam_1606, retro_cfam_1629, retro_cfam_1681, retro_cfam_1708, retro_cfam_1784, retro_cfam_1989, retro_cfam_2060, retro_cfam_2097, retro_cfam_2133, retro_cfam_266, retro_cfam_317, retro_cfam_324, retro_cfam_351, retro_cfam_353, retro_cfam_38, retro_cfam_381, retro_cfam_410, retro_cfam_446, retro_cfam_538, retro_cfam_623, retro_cfam_628, retro_cfam_705, retro_cfam_745, retro_cfam_783, retro_cfam_795, retro_cfam_821, retro_cfam_845, retro_cfam_860,
Felis catus ENSFCAG00000012812 possible_ortholog 3 retrogenes
retro_fcat_1842, retro_fcat_4, retro_fcat_530,
Macropus eugenii ENSMEUG00000010966 possible_ortholog 8 retrogenes
retro_meug_1178, retro_meug_126, retro_meug_1859, retro_meug_1910, retro_meug_1997, retro_meug_248, retro_meug_369, retro_meug_76,
Mus musculus ENSMUSG00000003038 possible_ortholog 2 retrogenes
retro_mmus_202, retro_mmus_2582,
Pteropus vampyrus ENSPVAG00000017269 ortholog_one2one 5 retrogenes
retro_pvam_1046, retro_pvam_1059, retro_pvam_1065, retro_pvam_379, retro_pvam_4,
Sorex araneus ENSSARG00000013139 ortholog_one2one 3 retrogenes
retro_sara_12, retro_sara_17, retro_sara_176,
Sus scrofa ENSSSCG00000003555 ortholog_one2one 3 retrogenes
retro_sscr_573, retro_sscr_66, retro_sscr_985,
Tupaia belangeri ENSTBEG00000016632 ortholog_one2many 33 retrogenes
retro_tbel_1351, retro_tbel_16, retro_tbel_1844, retro_tbel_21, retro_tbel_2219, retro_tbel_2498, retro_tbel_2670, retro_tbel_3050, retro_tbel_309, retro_tbel_3101, retro_tbel_3112, retro_tbel_3121, retro_tbel_3149, retro_tbel_320, retro_tbel_3413, retro_tbel_3462, retro_tbel_36, retro_tbel_389, retro_tbel_4058, retro_tbel_417, retro_tbel_4469, retro_tbel_448, retro_tbel_4615, retro_tbel_4644, retro_tbel_475, retro_tbel_50, retro_tbel_538, retro_tbel_62, retro_tbel_65, retro_tbel_66, retro_tbel_704, retro_tbel_732, retro_tbel_757,
Tursiops truncatus ENSTTRG00000005681 possible_ortholog 5 retrogenes
retro_ttru_1392, retro_ttru_1443, retro_ttru_3, retro_ttru_345, retro_ttru_788,
Vicugna pacos ENSVPAG00000008076 ortholog_one2many 1 retrogene
retro_vpac_183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_61 90.11 100.00
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2. retro_etel_165 67.78 97.78
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3. retro_etel_178 67.78 100.00
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4. retro_etel_253 85.39 97.78
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5. retro_etel_292 79.12 98.89
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6. retro_etel_298 56.47 91.11
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7. retro_etel_446 86.67 97.78
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8. retro_etel_481 74.03 84.44
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9. retro_etel_505 75.82 100.00
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10. retro_etel_511 73.91 100.00
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11. retro_etel_571 63.53 93.33
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12. retro_etel_768 59.55 97.78
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13. retro_etel_819 91.21 100.00
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14. retro_etel_881 57.47 95.56
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15. retro_etel_1035 61.11 75.56
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16. retro_etel_1097 63.53 92.22
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17. retro_etel_1210 72.22 98.89
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18. retro_etel_1253 71.11 98.89
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19. retro_etel_1282 63.74 98.89
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20. retro_etel_1298 72.53 98.89
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21. retro_etel_1314 70.97 98.89
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22. retro_etel_1346 69.66 97.78
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23. retro_etel_1398 54.35 98.89
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24. retro_etel_1582 67.27 58.89
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25. retro_etel_1690 72.22 97.78
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26. retro_etel_1710 60.32 66.67
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27. retro_etel_1836 79.12 100.00
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28. retro_etel_1845 57.95 96.67
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29. retro_etel_1939 67.42 97.78
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30. retro_etel_1945 68.54 97.78
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31. retro_etel_1951 76.92 100.00
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32. retro_etel_1961 65.22 74.44
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33. retro_etel_2079 72.83 98.89
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Download FASTA sequences of all ENSETEG00000013571 retrocopies