Parental gene:

PNP, ENSEEUG00000002411

Aliases:None
Description:purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:7892]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:scaffold_370847:44604..55041(-)


>ENSEEUG00000002411
ATGGAGAGCGGAGTCACATATGAAGATTACGAAGAGACTGCAAACTGGCTTCTGTCCCACACCAGCCACCGACCTCAAGT
GGCAGTGATCTGCGGTTCTGGGCTAGGAGGGCTGATTAACAAGTTAACCCAGGCCCAGGTGTTTGACTATAGTGACATAC
CACACTTTCCCCGGAGTACAGTCCCAGGTCATGCCGGTAGACTGGTGTTTGGGTTCCTGAGTGGCAGGGCCTGTGTGATG
ATGCAGGGCAGGTTCCACATGTACGAAGGCTACCCTCTCTCGAAGGTGACATTTCCAGTGAGGGTTTTCTGCCTTCTCGG
TGTGAACATTCTAGTCGTCACCAATGCCGCTGGAGGACTTAACCCCAAGTTCGAGGTTGGAGATATCATGCTGATTCGTG
ATCACATTAACCTCCCTGGTTTCTGTGGTCAGAACCCCCTCAGAGGACCCAATGAAGAAAGGTTTGGAGTCCGTTTCCCT
GCTATGTCTGATGCCTATGACCGAGACATAAGGCTTTTGGCTCACAGCACCTGGAAACAAATGGAGAATCAGCACCGAGA
ACTCCAGGAAGGCACCTATGTGATGCTGGCAGGTCCCAACTTTGAGACTGTGGCAGAGTCTCGCCTCTTGAAGCAGCTGG
GAGCAGATGCTGTTGGCATGAGTACGGTTCCAGAAGTGATCGTGGCAAGGCACTGTGGACTTCGAGTCTTCGGGTTCTCT
CTCATCACTAATAAGGTCATCATGGATTATGACTCTATAGAGAAGGCCAACCACGAAGAGGTGCTAGAGGCTGGGAAACA
AGCTGCACAGAAGCTAGAAGAGTTTATCTCCATTCTTATGGAGAACATTCCACAGGGCGGAAGTGCCAGCTAA

Library Parental gene expression (RPM)
SRP017611_brain 40 .45 RPM
SRP017611_kidney 125 .46 RPM
SRP017611_liver 16 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005373 ortholog_one2one 1 retrogene
retro_amel_1666,
Bos taurus ENSBTAG00000012317 ortholog_one2many 1 retrogene
retro_btau_1463,
Choloepus hoffmanni ENSCHOG00000009274 ortholog_one2many 5 retrogenes
retro_chof_1328, retro_chof_1595, retro_chof_1827, retro_chof_1933, retro_chof_348,
Callithrix jacchus ENSCJAG00000009676 ortholog_one2one 2 retrogenes
retro_cjac_1195, retro_cjac_1511,
Dasypus novemcinctus ENSDNOG00000011630 ortholog_one2one 1 retrogene
retro_dnov_322,
Felis catus ENSFCAG00000006934 ortholog_one2one 1 retrogene
retro_fcat_1368,
Homo sapiens ENSG00000198805 ortholog_one2one 1 retrogene
retro_hsap_2282,
Gorilla gorilla ENSGGOG00000002126 ortholog_one2one 1 retrogene
retro_ggor_1695,
Macropus eugenii ENSMEUG00000014512 ortholog_one2one 3 retrogenes
retro_meug_1282, retro_meug_1560, retro_meug_211,
Macaca mulatta ENSMMUG00000019126 ortholog_one2many 1 retrogene
retro_mmul_287,
Mustela putorius furo ENSMPUG00000018119 ortholog_one2one 2 retrogenes
retro_mputfur_420, retro_mputfur_822,
Nomascus leucogenys ENSNLEG00000010969 ortholog_one2one 1 retrogene
retro_nleu_1964,
Otolemur garnettii ENSOGAG00000013344 ortholog_one2many 4 retrogenes
retro_ogar_1631, retro_ogar_2141, retro_ogar_3083, retro_ogar_594,
Pongo abelii ENSPPYG00000005567 ortholog_one2one 1 retrogene
retro_pabe_1938,
Pan troglodytes ENSPTRG00000006095 ortholog_one2one 1 retrogene
retro_ptro_1616,
Pteropus vampyrus ENSPVAG00000010734 ortholog_one2one 1 retrogene
retro_pvam_1302,
Rattus norvegicus ENSRNOG00000009982 ortholog_one2many 1 retrogene
retro_rnor_891,
Tupaia belangeri ENSTBEG00000016378 ortholog_one2one 1 retrogene
retro_tbel_4632,
Tarsius syrichta ENSTSYG00000000748 ortholog_one2one 3 retrogenes
retro_tsyr_2057, retro_tsyr_2127, retro_tsyr_235,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_541 71.35 57.59
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Download FASTA sequences of all ENSEEUG00000002411 retrocopies