Parental gene:

PNP, ENSBTAG00000012317

Aliases:PNP, NP
Description:Purine nucleoside phosphorylase [Source:UniProtKB/Swiss-Prot;Acc:P55859]
Organism:Cow (Bos taurus)
Coordinates:10:26667692..26673918(-)


>ENSBTAG00000012317
ATGGCGAATGGATATACATATGAAGATTATCAAGACACTGCAAAATGGCTTTTGTCTCATACCGAACAGCGACCTCAAGT
GGCAGTGATCTGTGGTTCTGGGTTAGGAGGTCTGGTTAACAAATTGACTCAAGCCCAGACCTTTGACTACAGTGAAATAC
CAAACTTTCCAGAAAGTACAGTGCCAGGTCATGCTGGTCGACTGGTGTTTGGGATCTTGAATGGCAGAGCCTGTGTGATG
ATGCAGGGCAGGTTCCACATGTATGAAGGCTATCCGTTTTGGAAGGTGACATTCCCAGTGAGGGTTTTCCGGCTTCTGGG
TGTGGAGACCCTAGTGGTCACCAACGCAGCTGGAGGGCTCAACCCCAACTTTGAGGTTGGCGATATCATGCTGATCCGTG
ATCACATCAACCTACCTGGTTTCAGTGGTGAGAACCCTCTCAGAGGGCCCAATGAGGAAAGGTTTGGAGTTCGTTTCCCT
GCCATGTCTGATGCCTACGACCGGGATATGAGGCAGAAAGCTCACAGTACCTGGAAACAAATGGGGGAGCAAAGAGAGTT
ACAGGAAGGCACCTACGTGATGTTGGGGGGTCCCAATTTTGAGACTGTGGCAGAGTGTCGCCTGCTGCGGAATCTAGGGG
CAGATGCTGTTGGCATGAGCACAGTACCAGAAGTTATAGTCGCAAGACACTGTGGACTTCGAGTCTTTGGCTTCTCACTC
ATCACAAACAAGGTCATCATGGATTATGAAAGCCAGGGGAAGGCCAATCATGAGGAAGTACTAGAGGCTGGGAAGCAAGC
TGCACAGAAATTAGAGCAGTTTGTCTCCCTTCTTATGGCTAGCATTCCAGTGTCAGGGCACACCGGTTAA

Library Parental gene expression (RPM)
ERP005899_liver 244 .91 RPM
ERP005899_muscle 60 .71 RPM
SRP017611_brain 21 .15 RPM
SRP017611_kidney 91 .81 RPM
SRP017611_liver 109 .26 RPM
SRP030211_testis 14 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005373 ortholog_one2many 1 retrogene
retro_amel_1666,
Choloepus hoffmanni ENSCHOG00000009274 ortholog_many2many 5 retrogenes
retro_chof_1328, retro_chof_1595, retro_chof_1827, retro_chof_1933, retro_chof_348,
Callithrix jacchus ENSCJAG00000009676 ortholog_one2many 2 retrogenes
retro_cjac_1195, retro_cjac_1511,
Dasypus novemcinctus ENSDNOG00000011630 ortholog_one2many 1 retrogene
retro_dnov_322,
Erinaceus europaeus ENSEEUG00000002411 ortholog_one2many 1 retrogene
retro_eeur_541,
Felis catus ENSFCAG00000006934 ortholog_one2many 1 retrogene
retro_fcat_1368,
Homo sapiens ENSG00000198805 ortholog_one2many 1 retrogene
retro_hsap_2282,
Gorilla gorilla ENSGGOG00000002126 ortholog_one2many 1 retrogene
retro_ggor_1695,
Macropus eugenii ENSMEUG00000014512 ortholog_one2many 3 retrogenes
retro_meug_1282, retro_meug_1560, retro_meug_211,
Macaca mulatta ENSMMUG00000019126 ortholog_many2many 1 retrogene
retro_mmul_287,
Mustela putorius furo ENSMPUG00000018119 ortholog_one2many 2 retrogenes
retro_mputfur_420, retro_mputfur_822,
Nomascus leucogenys ENSNLEG00000010969 ortholog_one2many 1 retrogene
retro_nleu_1964,
Otolemur garnettii ENSOGAG00000013344 ortholog_many2many 4 retrogenes
retro_ogar_1631, retro_ogar_2141, retro_ogar_3083, retro_ogar_594,
Pongo abelii ENSPPYG00000005567 ortholog_one2many 1 retrogene
retro_pabe_1938,
Pan troglodytes ENSPTRG00000006095 ortholog_one2many 1 retrogene
retro_ptro_1616,
Pteropus vampyrus ENSPVAG00000010734 ortholog_one2many 1 retrogene
retro_pvam_1302,
Rattus norvegicus ENSRNOG00000009982 ortholog_many2many 1 retrogene
retro_rnor_891,
Tupaia belangeri ENSTBEG00000016378 ortholog_one2many 1 retrogene
retro_tbel_4632,
Tarsius syrichta ENSTSYG00000000748 ortholog_one2many 3 retrogenes
retro_tsyr_2057, retro_tsyr_2127, retro_tsyr_235,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1463 95.14 99.65
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Download FASTA sequences of all ENSBTAG00000012317 retrocopies