Parental gene:

NUDT9, ENSECAG00000019556

Aliases:None
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:HGNC Symbol;Acc:8056]
Organism:Horse (Equus caballus)
Coordinates:3:50305882..50323897(-)


>ENSECAG00000019556
ATGTCTGGTTCTAATGGTGCCAAAGAGAATTCCCACCACAAGGCTCGGACATCTCCTTACCCAGGTTCGGAAGTTCAACG
CAGCCACGTTCCTAATGAGAAAGTAGCCTGGCTTGTTGAGTGGAAAGACTATAATCCTGTGGAATACACTGCAGTCTCGG
TCTTGGCTGGGCCTAGGTGGGCAGATCCTCAGATCAGTGAAAGTACCTTTTCTCCCAAGTTTAATGAAAAGGATGGGCAT
GTTGAGAGAAAGAGCCAGAATGGACTGTATGAGATTGAAAATGGAAGACCTAGAAATCCTGCAGGACGGACGGGACTGGT
TGGCCGGGGTCTTTTGGGACGGTGGGGCCCAAATCATGCTGCAGATCCCATCATAACCAGGTGGAAAAGGGATAGAAGTG
GAAATAAAATCACCCACCCCATTTCTGGGAAAAACATCTTACAGTTTGTTGCAATAAAAAGGAAAGACTGTGGAGAATGG
GCAATCCCAGGGGGGATGGTGGATCCAGGAGAGAAGATTAGTGCCGCACTGAAAAGAGAATTTGGTGAGGAAGCTCTCAA
CTCCTTACAGAAATCTAGTGCTGAAAAGAGAGAATTAGAGGAACAGTTGCAGAAACTCTTCAGCCAGGAACATCTGGTG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 16 .00 RPM
SRP021940_cerebellum 19 .53 RPM
SRP021940_embryo 17 .08 RPM
SRP021940_placental_villous 20 .64 RPM
SRP021940_synovial_membrane 16 .75 RPM
SRP021940_testis 81 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003244 ortholog_one2one 1 retrogene
retro_amel_612,
Bos taurus ENSBTAG00000011354 ortholog_one2one 1 retrogene
retro_btau_1112,
Canis familiaris ENSCAFG00000009529 ortholog_one2one 1 retrogene
retro_cfam_1271,
Callithrix jacchus ENSCJAG00000006159 ortholog_one2one 1 retrogene
retro_cjac_1047,
Echinops telfairi ENSETEG00000019164 ortholog_one2many 1 retrogene
retro_etel_348,
Felis catus ENSFCAG00000003315 ortholog_one2one 1 retrogene
retro_fcat_1509,
Homo sapiens ENSG00000170502 ortholog_one2one 1 retrogene
retro_hsap_709,
Gorilla gorilla ENSGGOG00000014777 ortholog_one2one 1 retrogene
retro_ggor_602,
Loxodonta africana ENSLAFG00000011391 ortholog_one2one 1 retrogene
retro_lafr_224,
Macropus eugenii ENSMEUG00000012123 ortholog_one2one 4 retrogenes
retro_meug_1072, retro_meug_1345, retro_meug_1758, retro_meug_2162,
Monodelphis domestica ENSMODG00000020738 ortholog_one2many 2 retrogenes
retro_mdom_157, retro_mdom_706,
Mustela putorius furo ENSMPUG00000002258 ortholog_one2one 1 retrogene
retro_mputfur_585,
Nomascus leucogenys ENSNLEG00000009520 ortholog_one2one 1 retrogene
retro_nleu_464,
Oryctolagus cuniculus ENSOCUG00000002670 ortholog_one2one 2 retrogenes
retro_ocun_1045, retro_ocun_990,
Ochotona princeps ENSOPRG00000004055 ortholog_one2one 1 retrogene
retro_opri_1152,
Pongo abelii ENSPPYG00000014914 ortholog_one2one 1 retrogene
retro_pabe_613,
Pan troglodytes ENSPTRG00000016259 ortholog_one2one 1 retrogene
retro_ptro_506,
Pteropus vampyrus ENSPVAG00000004829 ortholog_one2one 1 retrogene
retro_pvam_475,
Sus scrofa ENSSSCG00000009223 ortholog_one2one 1 retrogene
retro_sscr_447,
Tursiops truncatus ENSTTRG00000004207 ortholog_one2one 1 retrogene
retro_ttru_1549,
Vicugna pacos ENSVPAG00000004012 ortholog_one2one 1 retrogene
retro_vpac_125,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_123 62.05 77.46
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Download FASTA sequences of all ENSECAG00000019556 retrocopies