Parental gene: | GINS2, ENSDNOG00000008760 |
| Aliases: | None |
| Description: | GINS complex subunit 2 (Psf2 homolog) [Source:HGNC Symbol;Acc:24575] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_35697:7822..13339(+) |
>ENSDNOG00000008760
ATGGAGGCGGCCGAGGTCGAGTTTCTGGCCGAGAAGGAGCTGGTCACCATCATCCCTAACTTCAGCCTGGACAAGATCTA
CCTTATCGGGGGGGATCTGGGGCCTTTTAACCCTGGCTTACCAGTGGAAGTGCCTCTTTGGTTGGCAATTAACCTGAAAC
AAAGACAGAAGTGTCGGCTGATCCTTGAGTGGATGGATGTAGAGAAGTTGGAGGCGAATCGGGACCATGAACGAAAGGAA
GAAACTTTTACCCCAATGCCCAGCCCTTACTACATGGAACTGACCAAACTCCTGCTCAATCATGCTTCAGACAACATTCC
GAAAGCAGATGAGATCCGGACCCTGGTCAAGGATGTGTGGGACACTCGCATAGCTAAACTCCGGGTCTCTGCTGACAGCT
TTGTGAAGCAGCAGGAGGCACATGCCAAGCTGGACAACTTGACCCTAATGGAGATGAACACCAGCGGGGCTTTTCTCACA
CAGGCACTGGGCCACATGTACAAGCTCCGCACAAACCTCCAGCCCTCGGAAAGTACCCAGTCTCAGGACTTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 5 .83 RPM |
| SRP012922_cerebellum | 2 .89 RPM |
| SRP012922_heart | 1 .62 RPM |
| SRP012922_kidney | 1 .37 RPM |
| SRP012922_liver | 0 .46 RPM |
| SRP012922_lung | 2 .14 RPM |
| SRP012922_quadricep_muscle | 2 .60 RPM |
| SRP012922_spleen | 8 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000017303 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000131153 | ortholog_one2one | 1 retrogene | |
| Gallus gallus | ENSGALG00000028131 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009069 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000014703 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016691 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020594 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007616 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000008430 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000004944 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015249 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002663 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006220 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_166 | 78.07 | 99.46 | Please wait, loading  |
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| 2. | retro_dnov_604 | 69.48 | 82.61 | Please wait, loading |
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| 3. | retro_dnov_1034 | 78.02 | 96.74 | Please wait, loading |
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| 4. | retro_dnov_2424 | 74.87 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000008760 retrocopies