Parental gene: | SNAP29, ENSDNOG00000005913 |
| Aliases: | None |
| Description: | synaptosomal-associated protein, 29kDa [Source:HGNC Symbol;Acc:11133] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1039:587..26931(+) |
>ENSDNOG00000005913
ATGTCGGCCTACCCCAAAAGCTATAACCCGTTCGACGATGACGCTGAGGACGAGGGCGCCCGACCGGCCCCGTGGGAAGA
CCCTCGCGACCTCCCCGACTGGCCCAACGACAGACAGCAGAGCCTGCGGCAGGAGGTGCTGCGCAGGGCCGAGGCCACGG
CCGCCAGCACCAGCAAGTCCCTGTCCCTCATGTACGAGTCCGAGAGGGTCGGGGTCGCCTCTTGCGAGGAACTCATCAGT
CTAGGAGTCTTAGAAAGCACAGAGAAGATGGTGGACATGGATCAAGATTTGAAGACCAGTCAAAAACACATTATGAACAT
TAAGAGTATGCTTAATGAGATAAATTACTTCAAAAAACCTGTGAAGAAGCCACCTGAACAGAATGGCACCCTTGCTCCCC
AGACCAGCAGCAGATTGAAAGAAGCTATAACTACAAGTAAAGAGCAGGAGTCGAAGTACCAGGCCAGCCACCCAAACCTC
AGAAAACTGGATAATTCAGACTCCATCATTGGAGGGGCCAGCTCTGCTGAGAGTGCCGAGGCTTACCCAAAGAACCTGCA
CCTCCGAGCCTATCATCAGAAGATCGACAGCAATCTCGATGAGCTGTCCCTGGGACTGGGCCGCCTGAAGGACATTGCCT
TGGGGATGCAGACGGAAATCGAGGAGCAAGACGACATCCTCGACCGGCTCACAACCAAAGTGGACAAGTTAGATGTCAAT
ATAAAGAGCACAGAAAGAAAAGTTCGACAACTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 10 .31 RPM |
| SRP012922_cerebellum | 13 .20 RPM |
| SRP012922_heart | 2 .78 RPM |
| SRP012922_kidney | 4 .65 RPM |
| SRP012922_liver | 4 .02 RPM |
| SRP012922_lung | 4 .73 RPM |
| SRP012922_quadricep_muscle | 1 .90 RPM |
| SRP012922_spleen | 6 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015201 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003137 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000108 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013003 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1401 | 57.03 | 50.60 | Please wait, loading  |
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| 2. | retro_dnov_1855 | 53.49 | 50.60 | Please wait, loading |
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| 3. | retro_dnov_2001 | 57.46 | 68.92 | Please wait, loading |
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| 4. | retro_dnov_2364 | 52.17 | 53.39 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000005913 retrocopies