Parental gene:

SNAP29, ENSCAFG00000015201

Aliases:None
Description:synaptosomal-associated protein, 29kDa [Source:HGNC Symbol;Acc:11133]
Organism:Dog (Canis familiaris)
Coordinates:26:30606193..30630262(-)


>ENSCAFG00000015201
ATGTCGGCCTACCCCAAGAGCTACAACCCGTTCGACGACGATGCGGAGGATGAGGGCGCCCGGCCGGCCCCGTGGAAGGA
CGACCGCGACGTCGCCGACGGGCCCTGCACGCCCGCGGACAGGCAGCAGTATCTGCGGCAGGAGGTGATGCGCGTGGCCC
AGGCCACAGCCGCCAGCACCGAGAGGTCCCTGTCCCTCATGTACGAGTCCGAGAAGGTCGGCGTCGCGTCTTCCGAGGAG
CTCGTCCGTCAGCGGGGTGTCTTAGAACGCACAGAGAAGATGGTGGACAAGATGGATCAAGATTTGAAGACCAGCCAGAA
GCACATTAACAGCATTAAGAGCATGTTTGGGGGGTTTGTCAATTACTTCAAATCCAAACCAACAGAGACGCCACCCGAAC
AGAATGGCACCCTTGCCCCCCAGGCTAACAGCAGATTGAAAGAAGCCATAAGTACCAGTAAAGCACAGGAGGCACAATAC
CAGGCCAGCCACCCAAACCTCAGGAAGCTGAATGACTCAGACTCTTTCCCTGGAGGCACCGGTTCTGCCGCGAGTACTGA
GGCTTACCCGAAGAACCCCCACCTTCGAGCCTATCACCAGAAGATCGACAGTAATTTAGATGAGCTGTCCGTGGGACTAG
GCCGGCTGAAGGACATAGCCCTGGGGATGCAGACGGAAATTGAGGAGCAAGATGACATTCTTGACCGCCTCACAACCAAA
GTGGACAAGTTAGATGTCAATATAAAAAGCACAGAAAGAAAAGTTAGGCAACTTTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 82 .23 RPM
SRP017611_brain 44 .14 RPM
SRP017611_kidney 57 .19 RPM
SRP017611_liver 37 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000003137 ortholog_one2one 1 retrogene
retro_cpor_1442,
Dasypus novemcinctus ENSDNOG00000005913 ortholog_one2one 4 retrogenes
retro_dnov_1401, retro_dnov_1855, retro_dnov_2001, retro_dnov_2364,
Nomascus leucogenys ENSNLEG00000000108 ortholog_one2one 1 retrogene
retro_nleu_2645,
Otolemur garnettii ENSOGAG00000013003 ortholog_one2one 1 retrogene
retro_ogar_3493,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1542 61.73 60.47
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Download FASTA sequences of all ENSCAFG00000015201 retrocopies