Parental gene:

ENSDNOG00000002470

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6440:7144..11060(-)


>ENSDNOG00000002470
ATGAAGTTCAATCCCTTTGTGACCTCTGATCGGAGCAAGAACCGTAAAAGGCATTTCAATGCACCTTCCCACATTCGCAG
GAAGATTATGTCTTCCCCTCTTTCCAAGGAGCTGAGACAGAAATATAATGTTCGATCCATGCCTATCCGAAAAGATGATG
AAGTTCANGTTGTGCGAGGACACTACAAAGGTCAGCAAATTGGCAAAGTAGTCCAGGTTTACAGGAAGAAATACGTCATC
TACATCGAACGGGTGCAGCGGGAGAAGGCTAATGGCACCACTGTCCATGTGGGCATTCACCCCAGCAAGGTAGTTATCAC
TAGGCTAAAACTGGATAAAGACCGCAAAAAGATCCTCGAACGTAAAGCCAAATCTCGCCAAGTAGGAAAGGAAAAGAATA
CAAGGAAGAAACAATTGAGAAGATGCAGGAATAAAAGAATCTTATGTACATTCCATTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 252 .81 RPM
SRP012922_cerebellum 157 .26 RPM
SRP012922_heart 154 .53 RPM
SRP012922_kidney 395 .63 RPM
SRP012922_liver 152 .02 RPM
SRP012922_lung 419 .69 RPM
SRP012922_quadricep_muscle 198 .87 RPM
SRP012922_spleen 374 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002453 possible_ortholog 7 retrogenes
retro_amel_1175, retro_amel_1535, retro_amel_1885, retro_amel_1934, retro_amel_360, retro_amel_499, retro_amel_900,
Bos taurus ENSBTAG00000012344 possible_ortholog 2 retrogenes
retro_btau_1090, retro_btau_230,
Choloepus hoffmanni ENSCHOG00000004703 ortholog_one2one 10 retrogenes
retro_chof_149, retro_chof_1893, retro_chof_2147, retro_chof_2276, retro_chof_2333, retro_chof_2383, retro_chof_244, retro_chof_312, retro_chof_816, retro_chof_942,
Callithrix jacchus ENSCJAG00000014372 possible_ortholog 8 retrogenes
retro_cjac_110, retro_cjac_119, retro_cjac_240, retro_cjac_250, retro_cjac_270, retro_cjac_297, retro_cjac_321, retro_cjac_362,
Dasypus novemcinctus ENSDNOG00000002289 within_species_paralog 35 retrogenes
retro_dnov_1106, retro_dnov_1147, retro_dnov_1171, retro_dnov_1258, retro_dnov_1304, retro_dnov_1319, retro_dnov_1344, retro_dnov_1381, retro_dnov_1501, retro_dnov_1676, retro_dnov_1819, retro_dnov_1959, retro_dnov_2039, retro_dnov_2041, retro_dnov_2061, retro_dnov_2078, retro_dnov_2103, retro_dnov_2116, retro_dnov_2121, retro_dnov_2287, retro_dnov_2297, retro_dnov_2438, retro_dnov_2545, retro_dnov_2580, retro_dnov_2632, retro_dnov_300, retro_dnov_306, retro_dnov_467, retro_dnov_646, retro_dnov_666, retro_dnov_681, retro_dnov_760, retro_dnov_850, retro_dnov_970, retro_dnov_985,
Felis catus ENSFCAG00000011259 possible_ortholog 13 retrogenes
retro_fcat_1090, retro_fcat_1151, retro_fcat_1198, retro_fcat_1236, retro_fcat_1257, retro_fcat_1309, retro_fcat_1412, retro_fcat_1652, retro_fcat_1801, retro_fcat_1845, retro_fcat_1965, retro_fcat_497, retro_fcat_801,
Homo sapiens ENSG00000161970 possible_ortholog 27 retrogenes
retro_hsap_1137, retro_hsap_1309, retro_hsap_1376, retro_hsap_1394, retro_hsap_191, retro_hsap_2108, retro_hsap_2165, retro_hsap_2253, retro_hsap_253, retro_hsap_267, retro_hsap_2946, retro_hsap_3118, retro_hsap_3260, retro_hsap_3324, retro_hsap_3490, retro_hsap_3700, retro_hsap_3803, retro_hsap_3813, retro_hsap_3914, retro_hsap_4043, retro_hsap_4061, retro_hsap_4874, retro_hsap_4932, retro_hsap_642, retro_hsap_691, retro_hsap_915, retro_hsap_998,
Gorilla gorilla ENSGGOG00000023944 ortholog_one2one 4 retrogenes
retro_ggor_2565, retro_ggor_270, retro_ggor_51, retro_ggor_974,
Myotis lucifugus ENSMLUG00000002176 possible_ortholog 1 retrogene
retro_mluc_232,
Macaca mulatta ENSMMUG00000003448 ortholog_one2one 22 retrogenes
retro_mmul_1117, retro_mmul_1361, retro_mmul_1398, retro_mmul_1497, retro_mmul_1710, retro_mmul_1773, retro_mmul_1899, retro_mmul_1986, retro_mmul_2052, retro_mmul_2163, retro_mmul_2332, retro_mmul_2344, retro_mmul_325, retro_mmul_360, retro_mmul_398, retro_mmul_405, retro_mmul_448, retro_mmul_548, retro_mmul_805, retro_mmul_903, retro_mmul_920, retro_mmul_992,
Monodelphis domestica ENSMODG00000006201 possible_ortholog 2 retrogenes
retro_mdom_36, retro_mdom_64,
Nomascus leucogenys ENSNLEG00000009981 possible_ortholog 1 retrogene
retro_nleu_76,
Otolemur garnettii ENSOGAG00000017070 possible_ortholog 3 retrogenes
retro_ogar_118, retro_ogar_255, retro_ogar_66,
Sarcophilus harrisii ENSSHAG00000006890 possible_ortholog 1 retrogene
retro_shar_458,
Sus scrofa ENSSSCG00000028850 possible_ortholog 9 retrogenes
retro_sscr_261, retro_sscr_363, retro_sscr_426, retro_sscr_427, retro_sscr_471, retro_sscr_485, retro_sscr_508, retro_sscr_609, retro_sscr_736,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_378 79.83 76.97
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2. retro_dnov_2054 81.15 78.29
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3. retro_dnov_2174 71.53 88.82
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Download FASTA sequences of all ENSDNOG00000002470 retrocopies