Parental gene:

BET1, ENSDNOG00000001012

Aliases:None
Description:Bet1 golgi vesicular membrane trafficking protein [Source:HGNC Symbol;Acc:14562]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6461:40011..69152(-)


>ENSDNOG00000001012
AAAATTGTTCTTCGTGAAGGAGTACCTCCTGGCCACTATGGCAACTACGGCTATGCTAACAGTGGATATAATGCCTGTGA
AGAAGAAAATGAGAGGCTCACTGAAAGTCTGAGAAACAAAGTAACTGCTATAAAATCTCTATCTATTGAAATAGGCCATG
AAGTTAAAAATCAAAACAAATTACTAGCTGAAATGGATTCACAATTTGATTCTACAACTGGATTTCTGGTGAATCCTTCA
GGTTCCAAGAGGAGCAATGGAAGCCTGTTTCTTCTAATTTCAGCTATTCTTTGGCAATTGTCCAGACACCTAAAAGGAAA
CAGACTTCCTTTCAGTCCAATCTACCAGAGCTACAGAATTATATAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 8 .75 RPM
SRP012922_cerebellum 5 .36 RPM
SRP012922_heart 4 .87 RPM
SRP012922_kidney 4 .93 RPM
SRP012922_liver 11 .15 RPM
SRP012922_lung 10 .54 RPM
SRP012922_quadricep_muscle 2 .77 RPM
SRP012922_spleen 17 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003424 ortholog_one2one 1 retrogene
retro_btau_1054,
Choloepus hoffmanni ENSCHOG00000001276 ortholog_one2one 1 retrogene
retro_chof_2211,
Callithrix jacchus ENSCJAG00000013720 ortholog_one2one 3 retrogenes
retro_cjac_1411, retro_cjac_2019, retro_cjac_3155,
Homo sapiens ENSG00000105829 ortholog_one2one 1 retrogene
retro_hsap_3809,
Gorilla gorilla ENSGGOG00000002176 ortholog_one2one 1 retrogene
retro_ggor_2560,
Loxodonta africana ENSLAFG00000000587 ortholog_one2one 1 retrogene
retro_lafr_1023,
Macaca mulatta ENSMMUG00000000007 ortholog_one2one 1 retrogene
retro_mmul_1656,
Nomascus leucogenys ENSNLEG00000015441 ortholog_one2one 1 retrogene
retro_nleu_2151,
Oryctolagus cuniculus ENSOCUG00000017029 ortholog_one2one 2 retrogenes
retro_ocun_1116, retro_ocun_355,
Ochotona princeps ENSOPRG00000004536 ortholog_one2one 4 retrogenes
retro_opri_201, retro_opri_249, retro_opri_388, retro_opri_880,
Pan troglodytes ENSPTRG00000019408 ortholog_one2one 1 retrogene
retro_ptro_2584,
Rattus norvegicus ENSRNOG00000011008 ortholog_one2one 2 retrogenes
retro_rnor_2195, retro_rnor_2196,
Sus scrofa ENSSSCG00000015325 ortholog_one2one 2 retrogenes
retro_sscr_455, retro_sscr_516,
Tupaia belangeri ENSTBEG00000000765 ortholog_one2one 2 retrogenes
retro_tbel_3115, retro_tbel_4272,
Tarsius syrichta ENSTSYG00000009729 ortholog_one2one 2 retrogenes
retro_tsyr_136, retro_tsyr_1843,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_60 58.33 59.50
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2. retro_dnov_393 71.88 51.24
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3. retro_dnov_1683 89.86 57.02
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Download FASTA sequences of all ENSDNOG00000001012 retrocopies