Parental gene:

CYB5B, ENSCPOG00000014234

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_22:7181644..7209310(-)


>ENSCPOG00000014234
ATGGCGACCGTGGAGGGTGGCAGCAGCGGCGAGAAAGGACAGGGCGGCGAGACCACCGTCACCTACTATCGGTTGGAGGA
GGTGGCGAAGCACAACTCTTTGAAGGAACTATGGCTGGTGATCCACGGGCGAGTCTACGATGTCACCCCCTTTCTTAACG
AGCATCCCGGTGGAGAAGAAGTTCTGCTGGAACAAGCAGGTATAGATGCAAGTGAAAGCTTTGAAGATGTAGGCCATTCC
TCTGATGCCAGAGAGATGCTGAAGCAGTACTACATTGGTGATCTCCATCCGAGTGACCTTAAACCTCAAAGTGGTAGCAA
GGGTCCTTCGAAAAATAATTCATGCAAAAGCTGCTGGTCGTATTGGATTTTCCCCATCGTAGGCGCTGTGCTCCTAGGTT
TGCTGTATCGTTACTACATGGCGGAAAGTAAATCCTCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 13 .69 RPM
SRP017611_kidney 14 .55 RPM
SRP017611_liver 39 .17 RPM
SRP040447_lung 23 .96 RPM
SRP040447_skeletal_muscle 4 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000007518 ortholog_one2one 1 retrogene
retro_apla_13,
Cavia porcellus ENSCPOG00000012111 within_species_paralog 1 retrogene
retro_cpor_1140,
Felis catus ENSFCAG00000024541 ortholog_one2one 1 retrogene
retro_fcat_1816,
Gallus gallus ENSGALG00000000660 ortholog_one2one 1 retrogene
retro_ggal_13,
Meleagris gallopavo ENSMGAG00000008619 ortholog_one2one 1 retrogene
retro_mgal_12,
Myotis lucifugus ENSMLUG00000006608 ortholog_one2one 1 retrogene
retro_mluc_1734,
Macaca mulatta ENSMMUG00000012039 possible_ortholog 1 retrogene
retro_mmul_128,
Mus musculus ENSMUSG00000031924 ortholog_one2one 1 retrogene
retro_mmus_2289,
Oryctolagus cuniculus ENSOCUG00000007729 possible_ortholog 2 retrogenes
retro_ocun_141, retro_ocun_255,
Pteropus vampyrus ENSPVAG00000015984 ortholog_one2one 1 retrogene
retro_pvam_977,
Sarcophilus harrisii ENSSHAG00000014200 ortholog_one2many 1 retrogene
retro_shar_688,
Ictidomys tridecemlineatus ENSSTOG00000011316 ortholog_one2one 1 retrogene
retro_itri_1296,
Tursiops truncatus ENSTTRG00000010016 ortholog_one2one 1 retrogene
retro_ttru_521,
Drosophila melanogaster FBgn0029854 possible_ortholog 1 retrogene
retro_dmel_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1117 75.42 80.82
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000014234 retrocopies