Parental gene:

ENSCPOG00000012328

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_181:1304595..1318086(+)


>ENSCPOG00000012328
CGTCAACCCCGTAGGAGGCTCGCCATGGCGATGAGCAGCAGCGGCGATGGTGGCTGCGTCCCAGAGCAGGAAAACTCGGT
GCTGTTTCGGCGCGGGACAGGCCAGAGTGATGACTCTGACATTTGGGATGATACAGCATTGATAAAAGCTTATGATAAAG
CTGTGGCTTCCTTTAAGTACGCTCTAAAGAATGGTGACATTTCAGATAAACCACAAGGAGAAATGTCCGGCAAACCGAAG
GGCACACCCAGAAGAAAACCTGTTAAGAAGAGTAAAAGCCAGAAGAAGAATACCACAGCTCCCTCAAAACAGTGGAAAGT
GGGTGACAGGTGTTCTGCTGTTTGGTCAGAAGATGGCTGCATTTATCCAGCTACAATCGCTTCTGTGGATTTGAAGAGAG
AAACCTGTGTTGTGGTCTATACTGGATATGGAAACAGGGAGGAACAAAATCTGTCTGATCTACTTTCCCCAAGCTCTGAA
GCAGCCAACAACATGGAACAGAACACACAGGAGAATGAAAATGGAAGTCAAGTTTCAACGGATGAAAGTGAGAACTCTTC
CAAGTCTCCAGGAAGCAAACCAAGTACGGTCAGGTCGAAAGCCACACCCTGGAACTCCTTTTTCCCTCCGCCACCACCCC
CCGTTCCTAGCTCAGGATCTGGACCTGGAAAGCCAGGTCTAAAATTCAGTGGCCTACCCCCACCCCCACCACCTCCACAC
TTCCTGTCATGCTGGCTGCCTCCATTTCCGGCTGGACCTCCAATGATCCCCCCGCCGCCTCCCATCTGTCCAGACTCGTT
TGATGATGCAGACGCACTGGGCAGCATGCTGATGTCGTGGTACATGAGTGGCTATCACACTGGCTACTACATGGGTTTCA
GACAAAATCAAAAAGAAGGGAGGAGCTCACATTTTAATTGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .49 RPM
SRP017611_kidney 3 .25 RPM
SRP017611_liver 2 .48 RPM
SRP040447_lung 8 .37 RPM
SRP040447_skeletal_muscle 4 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000007283 ortholog_one2one 4 retrogenes
retro_dnov_1239, retro_dnov_1613, retro_dnov_1637, retro_dnov_2175,
Echinops telfairi ENSETEG00000001406 ortholog_one2one 2 retrogenes
retro_etel_1549, retro_etel_2012,
Homo sapiens ENSG00000205571 ortholog_one2many 1 retrogene
retro_hsap_4140,
Gorilla gorilla ENSGGOG00000026704 ortholog_one2many 1 retrogene
retro_ggor_2780,
Myotis lucifugus ENSMLUG00000010603 ortholog_one2one 1 retrogene
retro_mluc_1623,
Macaca mulatta ENSMMUG00000020214 ortholog_one2many 1 retrogene
retro_mmul_216,
Nomascus leucogenys ENSNLEG00000004454 ortholog_one2one 1 retrogene
retro_nleu_1054,
Oryctolagus cuniculus ENSOCUG00000017097 ortholog_one2many 1 retrogene
retro_ocun_617,
Pan troglodytes ENSPTRG00000016955 ortholog_one2one 1 retrogene
retro_ptro_2813,
Sus scrofa ENSSSCG00000016970 ortholog_one2many 1 retrogene
retro_sscr_654,
Ictidomys tridecemlineatus ENSSTOG00000012288 ortholog_one2one 1 retrogene
retro_itri_968,
Tupaia belangeri ENSTBEG00000002399 ortholog_one2one 1 retrogene
retro_tbel_1033,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_988 100.00 97.71
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000012328 retrocopies