Parental gene:

BUB3, ENSCPOG00000011957

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_1:44722770..44732625(-)


>ENSCPOG00000011957
ATGACAGGTTCCAACGAGTTCAAGTTGAACCAGCCACCCGAGGATGGCATCTCCTCTGTGAAGTTCAGCCCCAACACCTC
TCAGTTCCTGCTGGTCTCCTCCTGGGACACGTCGGTGCGCCTTTACGATGTGCCAGCCAACTCCATGCGGCTCAAGTACC
AGCACACTGGCGCGGTCCTGGACTGCGCGTTCTATGATCCCACGCATGCATGGAGTGGGGGATTAGACCATCAGTTGAAA
ATGCATGATTTGAATACTGATCAAGAAAACCTTGTTGGAACTCATGATGCCCCTATTAGATGTGTTGAATACTGTCCAGA
AGTGAATGTGATGGTTACTGGAAGTTGGGATCAGACAGTTAAACTGTGGGATCCCAGAACTCCCTGTAATGCTGGGACCT
TCTCTCAGCCTGAAAAGGTGTACACGCTCTCAGTGTCTGGAGACCGGCTGATTGTGGGCACAGCAGGCCGCAGGGTGTTA
GTGTGGGACCTGCGGAACATGGGCTATGTGCAGCAGCGCAGGGAGTCCAGCCTGAAATACCAGACTCGTTGCATACGAGC
GTTTCCAAACAAACAGGGTTATGTATTAAGCTCCATTGAAGGCCGGGTGGCAGTCGAATACTTGGACCCAAGCCCTGAGG
TGCAGAAGAAAAAGTATGCCTTCAAATGCCATAGACTAAAAGAAAATAACATTGAGCAGATTTACCCAGTCAATGCCATT
TCCTTTCACAATATCCACAATACATTTGCCACAGGTGGTTCTGATGGATTTGTAAATATTTGGGATCCATTTAACAAAAA
ACGACTGTGCCAGTTTCATCGGTACCCCACCAGCATCGCATCGCTTGCCTTCAGCAATGATGGGACTACGCTTGCAATAG
CATCATCATACATGTATGAAATGGATGACACGGAACATCCTGAAGATGGTATCTTCATTCGCCAAGTGACAGATGCAGAA
ACAAAACCCAAGTCACCATGTACTTGA

Library Parental gene expression (RPM)
SRP017611_brain 26 .34 RPM
SRP017611_kidney 28 .47 RPM
SRP017611_liver 18 .06 RPM
SRP040447_lung 37 .45 RPM
SRP040447_skeletal_muscle 20 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012700 ortholog_one2one 1 retrogene
retro_cfam_399,
Callithrix jacchus ENSCJAG00000001066 ortholog_one2one 1 retrogene
retro_cjac_3085,
Homo sapiens ENSG00000154473 ortholog_one2one 1 retrogene
retro_hsap_3887,
Gorilla gorilla ENSGGOG00000023971 ortholog_one2one 1 retrogene
retro_ggor_2614,
Myotis lucifugus ENSMLUG00000017732 ortholog_one2one 1 retrogene
retro_mluc_627,
Macaca mulatta ENSMMUG00000003092 ortholog_one2one 1 retrogene
retro_mmul_1729,
Nomascus leucogenys ENSNLEG00000027075 ortholog_one2one 1 retrogene
retro_nleu_1887,
Procavia capensis ENSPCAG00000007736 ortholog_one2one 1 retrogene
retro_pcap_412,
Pongo abelii ENSPPYG00000002731 ortholog_one2one 1 retrogene
retro_pabe_3168,
Ictidomys tridecemlineatus ENSSTOG00000021785 ortholog_one2one 1 retrogene
retro_itri_1095,
Tarsius syrichta ENSTSYG00000013444 ortholog_one2one 2 retrogenes
retro_tsyr_1652, retro_tsyr_732,
Tursiops truncatus ENSTTRG00000016194 ortholog_one2one 1 retrogene
retro_ttru_1136,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_997 83.23 50.91
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Download FASTA sequences of all ENSCPOG00000011957 retrocopies