Parental gene:

ARPP19, ENSCPOG00000011228

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_23:29960262..29973179(-)


>ENSCPOG00000011228
ATGTCCGCTGAGGTGCCCGAGGCGGCATCGGCCGAGGAGCAGAAGGAAATGGAAGATAAAGTGACCAGTCCGGAGAAAGC
TGAAGAAGCAAAACTGAAAGCAAGGTATCCTCACCTTGGACAGAAGCCTGGAGGTTCTGATTTTCTAAGGAAACGATTGC
AGAAAGGGCAAAAATATTTTGATTCTGGGGATTACAACATGGCTAAGGCAAAGATGAAGAACAAACAGCTGCCCACTGCG
ACCCCAGATAAGACCGAGGTCACTGGTGACCACATTCCCACTCCACAGGACCTTCCTCAGCGGAAGCCTTCCCTTGTCAC
GAGCAAGCTGGCTGGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 118 .43 RPM
SRP017611_kidney 26 .80 RPM
SRP017611_liver 38 .91 RPM
SRP040447_lung 21 .49 RPM
SRP040447_skeletal_muscle 47 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011022 ortholog_one2one 5 retrogenes
retro_btau_1259, retro_btau_1821, retro_btau_1845, retro_btau_952, retro_btau_981,
Canis familiaris ENSCAFG00000032515 ortholog_one2one 2 retrogenes
retro_cfam_1375, retro_cfam_1402,
Dasypus novemcinctus ENSDNOG00000004474 ortholog_one2one 9 retrogenes
retro_dnov_1086, retro_dnov_1576, retro_dnov_1960, retro_dnov_2150, retro_dnov_2427, retro_dnov_557, retro_dnov_616, retro_dnov_644, retro_dnov_662,
Dipodomys ordii ENSDORG00000011321 possible_ortholog 2 retrogenes
retro_dord_194, retro_dord_33,
Echinops telfairi ENSETEG00000015550 ortholog_one2one 1 retrogene
retro_etel_585,
Gorilla gorilla ENSGGOG00000025250 possible_ortholog 1 retrogene
retro_ggor_198,
Nomascus leucogenys ENSNLEG00000006551 ortholog_one2one 2 retrogenes
retro_nleu_2533, retro_nleu_2884,
Oryctolagus cuniculus ENSOCUG00000015489 ortholog_one2one 10 retrogenes
retro_ocun_1182, retro_ocun_1297, retro_ocun_1398, retro_ocun_1573, retro_ocun_1731, retro_ocun_1768, retro_ocun_310, retro_ocun_473, retro_ocun_479, retro_ocun_698,
Otolemur garnettii ENSOGAG00000013865 possible_ortholog 1 retrogene
retro_ogar_591,
Pongo abelii ENSPPYG00000006487 possible_ortholog 2 retrogenes
retro_pabe_120, retro_pabe_1923,
Sus scrofa ENSSSCG00000004618 ortholog_one2one 1 retrogene
retro_sscr_603,
Tursiops truncatus ENSTTRG00000004804 ortholog_one2one 1 retrogene
retro_ttru_172,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1148 69.30 100.00
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Download FASTA sequences of all ENSCPOG00000011228 retrocopies