Parental gene:

MAX, ENSCPOG00000010172

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_20:9999264..10024000(-)


>ENSCPOG00000010172
ATGAGCGATAACGATGACATCGAGGTGGAGAGCGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCA
TCATAATGCACTGGAACGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTTCCATCACTCC
AAGGAGAGAAGGCATCCCGGGCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTACATGCGAAGGAAAAACCACACA
CACCAGCAAGATATTGATGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAAGTCCGTGCACTGGAGAAAGCGAGGTC
GAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAGCAGCCTCTACACCAACTCCAAGGGCAGCACCATCTCTGCCT
TCGATGGGGGCTCGGACTCCAGCTCGGAGTCGGAGCCCGAAGAGCCCCAGAGCAGGAAGAAACTCCGGATGGAGGCCAGC
TAA

Library Parental gene expression (RPM)
SRP017611_brain 23 .01 RPM
SRP017611_kidney 17 .59 RPM
SRP017611_liver 7 .70 RPM
SRP040447_lung 31 .88 RPM
SRP040447_skeletal_muscle 9 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003472 ortholog_one2one 2 retrogenes
retro_amel_1261, retro_amel_1606,
Canis familiaris ENSCAFG00000016212 ortholog_one2one 2 retrogenes
retro_cfam_1179, retro_cfam_1325,
Callithrix jacchus ENSCJAG00000019702 ortholog_one2one 2 retrogenes
retro_cjac_2057, retro_cjac_2556,
Erinaceus europaeus ENSEEUG00000003973 ortholog_one2one 3 retrogenes
retro_eeur_216, retro_eeur_344, retro_eeur_37,
Echinops telfairi ENSETEG00000002967 ortholog_one2one 1 retrogene
retro_etel_1294,
Felis catus ENSFCAG00000010347 ortholog_one2one 1 retrogene
retro_fcat_278,
Macaca mulatta ENSMMUG00000004341 ortholog_one2one 1 retrogene
retro_mmul_1648,
Mustela putorius furo ENSMPUG00000006859 ortholog_one2one 3 retrogenes
retro_mputfur_1218, retro_mputfur_1615, retro_mputfur_192,
Mus musculus ENSMUSG00000059436 ortholog_one2one 8 retrogenes
retro_mmus_2891, retro_mmus_2892, retro_mmus_2893, retro_mmus_2894, retro_mmus_2991, retro_mmus_2992, retro_mmus_2993, retro_mmus_2994,
Nomascus leucogenys ENSNLEG00000014373 ortholog_one2one 1 retrogene
retro_nleu_1122,
Ochotona princeps ENSOPRG00000016245 ortholog_one2one 1 retrogene
retro_opri_945,
Pongo abelii ENSPPYG00000005911 ortholog_one2one 1 retrogene
retro_pabe_3097,
Rattus norvegicus ENSRNOG00000008049 ortholog_one2one 3 retrogenes
retro_rnor_1653, retro_rnor_1877, retro_rnor_2369,
Ictidomys tridecemlineatus ENSSTOG00000028142 ortholog_one2many 1 retrogene
retro_itri_42,
Tupaia belangeri ENSTBEG00000012645 ortholog_one2one 1 retrogene
retro_tbel_3407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_710 76.73 97.50
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Download FASTA sequences of all ENSCPOG00000010172 retrocopies