Parental gene:

STARD3NL, ENSCPOG00000004394

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_30:16200724..16216074(+)


>ENSCPOG00000004394
ATGCACCCCTTTCCAGGAGACATGGAGAACGCTCTCACAGGGAGCCAGAGCTCCCACGCTTCTCTGCGCGATGTCCATTC
CATCAACGCCACACAGCTCATGGCCAGGATCGAGTCCTATGAAGGAAGGGACAAGAAAGGCATATCTGACGTCAGGAGGA
CTTTCTGTTTGTTTGTCACCTTTGACCTCTTGTTTGTAACATTACTGTGGATAATAGAGTTAAATGTGAACGGAGGCATT
GAGAACACGTTGGAGAAGGAGGTGGTGCAGTACGACTACTACTCTTCTTATTTTGATATATTCCTCTTGGCAGTTTTCCG
GTTTAAAGTGTTGATCCTCGCATATGCTGTGTGCAGACTGCGCCACTGGTGGGCAATCGCGTTGACGACAGCAGTGACCA
GTGCCTTTCTACTAGCGAAAGTGATCCTCTCAAAGCTTTTCTCGCAAGGGGCGTTTGGCTACGTGCTGCCCATCATTTCA
TTCATCCTTGCCTGGATTGAAACATGGTTCCTAGATTTCAAAGTGTTACCTCAAGAAGCAGAAGAGGAAAACAGACTCCT
TATTGTTCAGGATGCATCGGAGAGGGCCGCCCTCATTCCTGCGGGTCTTTCAGATGGTCAGTTTTATTCCCCTCCTGAAT
CTGAAGCAGGATCTGACGAACAAGCTGAGGAAAAACAGGATAGTGAGAAAGCACTTTTAGAACTC

Library Parental gene expression (RPM)
SRP017611_brain 32 .61 RPM
SRP017611_kidney 48 .78 RPM
SRP017611_liver 7 .40 RPM
SRP040447_lung 54 .83 RPM
SRP040447_skeletal_muscle 7 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000038795 ortholog_one2one 1 retrogene
retro_btau_264,
Choloepus hoffmanni ENSCHOG00000008990 ortholog_one2one 1 retrogene
retro_chof_984,
Callithrix jacchus ENSCJAG00000012622 ortholog_one2one 1 retrogene
retro_cjac_3042,
Dasypus novemcinctus ENSDNOG00000017960 ortholog_one2one 1 retrogene
retro_dnov_2389,
Equus caballus ENSECAG00000005250 ortholog_one2one 1 retrogene
retro_ecab_709,
Microcebus murinus ENSMICG00000000945 ortholog_one2one 1 retrogene
retro_mmur_388,
Macaca mulatta ENSMMUG00000023659 ortholog_one2one 1 retrogene
retro_mmul_2643,
Ictidomys tridecemlineatus ENSSTOG00000014750 ortholog_one2one 1 retrogene
retro_itri_286,
Tursiops truncatus ENSTTRG00000004099 ortholog_one2one 1 retrogene
retro_ttru_864,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1237 62.09 89.36
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Download FASTA sequences of all ENSCPOG00000004394 retrocopies