Parental gene:

ACP1, ENSCPOG00000002862

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_75:2413914..2423028(+)


>ENSCPOG00000002862
ATGGCTGAACGCGGGCTGAAGTCGGTGCTGTTCGTGTGTCTAGGTAACATTTGCCGGTCACCCATTGCAGAAGCAGTTTT
CAGAAAACTTGTTACTGATCAAAACATTTCAGATAACTGGGCCATTGACAGTGGAGCTGTTTCCGACTGGAACGTGGGCC
GGGCTCCGGACCCAAGAGCTGTGAGCTGCCTAAGAAATCATGGCATTAGCACAGCCCATAAGGCAAGACAGGTTACCAAA
GAGGACTTTGCAACGTTCGACTACATGCTGTGTATGGACGAAAGCAATCTGAGAGATTTGACTAGAAAAAGTAATCAAGT
TAAAAACTGCAAAGCTAGAATTGAACTGCTCGGGAGCTATGATCCACAGAAACAGCTCATCATTGAAGATCCCTATTACG
GGAATGAGTCCGACTTCGAGCAGGTGTACCAGCAGTGTGTCCGGTGTTGCAAAGCCTTCCTGGAGAAGGCCTCCTAG

Library Parental gene expression (RPM)
SRP017611_brain 16 .97 RPM
SRP017611_kidney 14 .87 RPM
SRP017611_liver 12 .19 RPM
SRP040447_lung 14 .80 RPM
SRP040447_skeletal_muscle 13 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009554 ortholog_one2one 2 retrogenes
retro_amel_705, retro_amel_761,
Canis familiaris ENSCAFG00000030097 ortholog_one2one 1 retrogene
retro_cfam_1126,
Choloepus hoffmanni ENSCHOG00000003891 possible_ortholog 94 retrogenes
retro_chof_1010, retro_chof_1053, retro_chof_1073, retro_chof_1099, retro_chof_1100, retro_chof_1144, retro_chof_119, retro_chof_1190, retro_chof_121, retro_chof_1259, retro_chof_1265, retro_chof_1275, retro_chof_1330, retro_chof_1351, retro_chof_1359, retro_chof_1389, retro_chof_1390, retro_chof_1412, retro_chof_142, retro_chof_1444, retro_chof_1447, retro_chof_1508, retro_chof_1567, retro_chof_1570, retro_chof_1593, retro_chof_1632, retro_chof_1633, retro_chof_1658, retro_chof_1684, retro_chof_169, retro_chof_1698, retro_chof_17, retro_chof_1716, retro_chof_174, retro_chof_1799, retro_chof_1802, retro_chof_1815, retro_chof_1833, retro_chof_1838, retro_chof_1864, retro_chof_1941, retro_chof_1956, retro_chof_1993, retro_chof_2012, retro_chof_2041, retro_chof_2044, retro_chof_2091, retro_chof_2165, retro_chof_2192, retro_chof_2208, retro_chof_2228, retro_chof_2259, retro_chof_2344, retro_chof_2378, retro_chof_2384, retro_chof_2443, retro_chof_245, retro_chof_2478, retro_chof_2512, retro_chof_2532, retro_chof_2542, retro_chof_2551, retro_chof_261, retro_chof_262, retro_chof_2622, retro_chof_2636, retro_chof_2643, retro_chof_2653, retro_chof_2654, retro_chof_2678, retro_chof_2701, retro_chof_2705, retro_chof_2707, retro_chof_319, retro_chof_377, retro_chof_460, retro_chof_598, retro_chof_603, retro_chof_649, retro_chof_650, retro_chof_66, retro_chof_727, retro_chof_80, retro_chof_803, retro_chof_83, retro_chof_842, retro_chof_934, retro_chof_939, retro_chof_958, retro_chof_962, retro_chof_986, retro_chof_991, retro_chof_994, retro_chof_999,
Dasypus novemcinctus ENSDNOG00000017382 ortholog_one2many 32 retrogenes
retro_dnov_1166, retro_dnov_1213, retro_dnov_1234, retro_dnov_1255, retro_dnov_1302, retro_dnov_136, retro_dnov_1373, retro_dnov_1393, retro_dnov_1499, retro_dnov_1553, retro_dnov_1601, retro_dnov_1685, retro_dnov_1709, retro_dnov_1732, retro_dnov_1895, retro_dnov_1937, retro_dnov_1950, retro_dnov_2320, retro_dnov_2349, retro_dnov_2509, retro_dnov_2582, retro_dnov_297, retro_dnov_312, retro_dnov_355, retro_dnov_474, retro_dnov_501, retro_dnov_535, retro_dnov_650, retro_dnov_768, retro_dnov_81, retro_dnov_830, retro_dnov_987,
Dipodomys ordii ENSDORG00000016469 ortholog_one2one 6 retrogenes
retro_dord_112, retro_dord_156, retro_dord_383, retro_dord_410, retro_dord_541, retro_dord_55,
Echinops telfairi ENSETEG00000013764 possible_ortholog 18 retrogenes
retro_etel_100, retro_etel_1034, retro_etel_110, retro_etel_1204, retro_etel_1655, retro_etel_1718, retro_etel_1824, retro_etel_1861, retro_etel_1940, retro_etel_2133, retro_etel_230, retro_etel_343, retro_etel_398, retro_etel_420, retro_etel_679, retro_etel_797, retro_etel_82, retro_etel_958,
Homo sapiens ENSG00000143727 ortholog_one2one 5 retrogenes
retro_hsap_1627, retro_hsap_1666, retro_hsap_1667, retro_hsap_529, retro_hsap_603,
Gorilla gorilla ENSGGOG00000015577 possible_ortholog 5 retrogenes
retro_ggor_1228, retro_ggor_1256, retro_ggor_485, retro_ggor_532, retro_ggor_72,
Loxodonta africana ENSLAFG00000002966 possible_ortholog 4 retrogenes
retro_lafr_1053, retro_lafr_1227, retro_lafr_336, retro_lafr_916,
Macropus eugenii ENSMEUG00000010733 ortholog_one2one 3 retrogenes
retro_meug_1736, retro_meug_706, retro_meug_806,
Myotis lucifugus ENSMLUG00000017707 possible_ortholog 4 retrogenes
retro_mluc_133, retro_mluc_1970, retro_mluc_548, retro_mluc_686,
Macaca mulatta ENSMMUG00000017097 ortholog_one2one 2 retrogenes
retro_mmul_1575, retro_mmul_2447,
Monodelphis domestica ENSMODG00000025764 ortholog_one2many 3 retrogenes
retro_mdom_236, retro_mdom_292, retro_mdom_364,
Nomascus leucogenys ENSNLEG00000008359 ortholog_one2many 6 retrogenes
retro_nleu_1784, retro_nleu_2230, retro_nleu_2683, retro_nleu_2792, retro_nleu_2821, retro_nleu_2915,
Otolemur garnettii ENSOGAG00000000301 ortholog_one2one 5 retrogenes
retro_ogar_1665, retro_ogar_2357, retro_ogar_3182, retro_ogar_426, retro_ogar_471,
Pan troglodytes ENSPTRG00000011605 ortholog_one2one 5 retrogenes
retro_ptro_1129, retro_ptro_2959, retro_ptro_3050, retro_ptro_3080, retro_ptro_446,
Pteropus vampyrus ENSPVAG00000013387 ortholog_one2one 5 retrogenes
retro_pvam_1117, retro_pvam_1401, retro_pvam_28, retro_pvam_781, retro_pvam_944,
Tarsius syrichta ENSTSYG00000004864 ortholog_one2one 7 retrogenes
retro_tsyr_1013, retro_tsyr_1214, retro_tsyr_1477, retro_tsyr_1482, retro_tsyr_209, retro_tsyr_444, retro_tsyr_523,
Tursiops truncatus ENSTTRG00000010770 ortholog_one2one 4 retrogenes
retro_ttru_130, retro_ttru_1934, retro_ttru_293, retro_ttru_392,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_215 62.14 86.71
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cpor_614 54.55 73.42
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_cpor_678 51.65 56.96
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_cpor_868 50.75 83.54
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000002862 retrocopies