Parental gene:

ENSCJAG00000018851

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:107191077..107196148(+)


>ENSCJAG00000018851
ATGGCGTCGGCGGCGGTGGCGCTAAGGATCCGGACAGCCGTTACATCCTTGCTGAGCCCCTCTCCAGCTACAGCTCTTGC
TGTCAGATATGCTTCCAAGAAGACGGGTGGTAGCTCCAAAAACCTTGGTGGAAAGTCATCAGGCAGACGCCTAGGCATTA
AGAAAATGGAAGGACACTATGTTCATGCTGGGAACATCCTTGGAACACAGCGCCATTTCCGCTGGCACCCAGGTGCCCAT
GTGGGTCTTGGGAAGAATAAATGTCTATATGCCCTGGAAGAGGGGATAGTCCACTACACTAAGGATGTCTACGTGCCTCA
TCCCAGAAATATGGAGGCTGTGGATCTCATCACCAGGCTGCCCAAGGGTGCTGTGCTCTACAAGACTTTTGTCCACGTGG
TTCCTACCAAACCTGAGGGCACCTTCAAACTGGTAGCTATGCTTTGA

Library Parental gene expression (RPM)
SRP051959_colon 4 .53 RPM
SRP051959_heart 4 .67 RPM
SRP051959_kidney 5 .32 RPM
SRP051959_liver 6 .00 RPM
SRP051959_lung 3 .14 RPM
SRP051959_lymph_node 3 .47 RPM
SRP051959_skeletal_muscle 6 .79 RPM
SRP051959_spleen 3 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017031 ortholog_one2many 1 retrogene
retro_cfam_1454,
Choloepus hoffmanni ENSCHOG00000005103 ortholog_one2many 1 retrogene
retro_chof_943,
Dasypus novemcinctus ENSDNOG00000023845 ortholog_one2many 2 retrogenes
retro_dnov_1233, retro_dnov_1731,
Erinaceus europaeus ENSEEUG00000010549 ortholog_many2many 3 retrogenes
retro_eeur_126, retro_eeur_22, retro_eeur_9,
Echinops telfairi ENSETEG00000014252 ortholog_many2many 2 retrogenes
retro_etel_13, retro_etel_893,
Microcebus murinus ENSMICG00000009698 ortholog_one2many 1 retrogene
retro_mmur_624,
Macaca mulatta ENSMMUG00000017231 ortholog_many2many 1 retrogene
retro_mmul_64,
Mus musculus ENSMUSG00000024414 ortholog_one2many 2 retrogenes
retro_mmus_1696, retro_mmus_2918,
Oryctolagus cuniculus ENSOCUG00000004601 ortholog_one2many 2 retrogenes
retro_ocun_1026, retro_ocun_1936,
Otolemur garnettii ENSOGAG00000005385 ortholog_many2many 1 retrogene
retro_ogar_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_28 99.32 100.00
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2. retro_cjac_378 90.48 99.32
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Download FASTA sequences of all ENSCJAG00000018851 retrocopies