Parental gene:

C1orf146, ENSCJAG00000017547

Aliases:None
Description:chromosome 1 open reading frame 146 [Source:HGNC Symbol;Acc:24032]
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:128525727..128561762(+)


>ENSCJAG00000017547
ATGGCTGAAAGTGGAAAAGAAAAAATAAAATGGACAACCACCATTATTGTTAGCTCATCTCTTAAGAGTTATGAAATTGC
AACTGCCCTAGAAAATCGAAGCCACAAGGTTAGATATTCAGATTCAGTGGAAAATGGATCAATTATATTTTCTCTTTCTG
GAGTTGCATTTTTATTAATGGATACTAAGGAATGTCTTACGTCAACTGAAGAAATATTTCTAGCCAAAATTGAGAAATTT
ATTAACATTCACCAAAATAGTTTTTTGGTTCTGTCTGCTGCCCTCCATGGGCCTGAAGAAAGGAAACTGATGTTCAGAAT
TCAGCAGAGATTCCTGGGTTGTAACTTAAGAATACTTCCAGTACACAACACAGTAAATGCTATTAATCTTATGTGCACTA
TAGCGAAGACTACCTCCAAACCATACGTAGATAGCATCTGCTACAGAATGATAACAGCTAAAGCTTACATCACTGAGCAA
AGTCCTGTTTGGAAAACACTTCAGAAGATAAAACTGAGTAGTGATTCAGTTAACCCAAACTAG

Library Parental gene expression (RPM)
SRP051959_colon 0 .00 RPM
SRP051959_heart 0 .00 RPM
SRP051959_kidney 0 .00 RPM
SRP051959_liver 0 .00 RPM
SRP051959_lung 0 .02 RPM
SRP051959_lymph_node 0 .02 RPM
SRP051959_skeletal_muscle 0 .00 RPM
SRP051959_spleen 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000027936 ortholog_one2one 1 retrogene
retro_btau_490,
Choloepus hoffmanni ENSCHOG00000004012 ortholog_one2one 1 retrogene
retro_chof_2167,
Erinaceus europaeus ENSEEUG00000003083 ortholog_one2one 1 retrogene
retro_eeur_601,
Homo sapiens ENSG00000203910 ortholog_one2one 1 retrogene
retro_hsap_3381,
Gorilla gorilla ENSGGOG00000006653 ortholog_one2one 1 retrogene
retro_ggor_2289,
Macropus eugenii ENSMEUG00000013311 ortholog_one2one 1 retrogene
retro_meug_143,
Myotis lucifugus ENSMLUG00000016984 ortholog_one2one 1 retrogene
retro_mluc_1260,
Macaca mulatta ENSMMUG00000010094 ortholog_one2one 1 retrogene
retro_mmul_2107,
Nomascus leucogenys ENSNLEG00000010426 ortholog_one2one 1 retrogene
retro_nleu_970,
Pongo abelii ENSPPYG00000001156 ortholog_one2one 1 retrogene
retro_pabe_2780,
Pan troglodytes ENSPTRG00000030530 ortholog_one2one 1 retrogene
retro_ptro_2298,
Ictidomys tridecemlineatus ENSSTOG00000012506 ortholog_one2one 1 retrogene
retro_itri_404,
Tursiops truncatus ENSTTRG00000014426 ortholog_one2one 1 retrogene
retro_ttru_1727,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1817 54.40 67.22
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Download FASTA sequences of all ENSCJAG00000017547 retrocopies