Parental gene:

CRLF3, ENSCJAG00000014163

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:92519395..92566713(+)


>ENSCJAG00000014163
ATGAGGGGGGCGATGGAGTTGGAGCCTGAGCTGCTGCTGCAGGAGGCCCGCGAGAGCGTGGAAGCGGCGCAGAGCTATCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGGGAGGCGCGGAGGCAGATCAAAGAGAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGGAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACATGGAGTCACCACTGCAGA
AGACTTAGTCCGAGAAGGTGAGATCGCCATGCTTGATGGTGTAGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTGCCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATTGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGATTATAGGCTCC
AGTTTCGTAAATCTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAATGTTGATTATCAGTTCAGAGTCTGTGCCCGAGGAGACGGCCGACAGGAGTGGAGTCCTTGGAGCGTCCCCCAGAT
AGGTCATTCTACATTGGTGCCTCATGAGTGGACAGCTGGCTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TCCGGAACGATTCTGAATCATCAGGTGTTCTCTACTCCAGAGCTCCAACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAACCAGACAGAAGAGATAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGAACAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCTGCAG
TTACTTCTGGGTCCACTGTCACATTTGACATTGAAGCCGTGACTCTAGGAACCACCAATAATAGTGAAGGTGGAAACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAACAGAGAAGTGGTTTTTGATTGGTTACTTGATCAATCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG

Library Parental gene expression (RPM)
SRP051959_colon 6 .01 RPM
SRP051959_heart 12 .16 RPM
SRP051959_kidney 4 .90 RPM
SRP051959_liver 4 .07 RPM
SRP051959_lung 11 .81 RPM
SRP051959_lymph_node 21 .57 RPM
SRP051959_skeletal_muscle 3 .56 RPM
SRP051959_spleen 10 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000176390 ortholog_one2one 3 retrogenes
retro_hsap_2121, retro_hsap_2133, retro_hsap_3360,
Gorilla gorilla ENSGGOG00000005002 ortholog_one2one 3 retrogenes
retro_ggor_1644, retro_ggor_1649, retro_ggor_2278,
Macaca mulatta ENSMMUG00000009069 ortholog_one2many 2 retrogenes
retro_mmul_1002, retro_mmul_998,
Mus musculus ENSMUSG00000017561 ortholog_one2one 1 retrogene
retro_mmus_368,
Nomascus leucogenys ENSNLEG00000005850 ortholog_one2one 4 retrogenes
retro_nleu_1957, retro_nleu_2534, retro_nleu_2899, retro_nleu_2900,
Pongo abelii ENSPPYG00000008142 ortholog_one2one 3 retrogenes
retro_pabe_1925, retro_pabe_1984, retro_pabe_2672,
Pan troglodytes ENSPTRG00000008963 ortholog_one2one 2 retrogenes
retro_ptro_1560, retro_ptro_2175,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1183 74.04 87.10
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000014163 retrocopies