Parental gene:

AMMECR1L, ENSCJAG00000010743

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:31271409..31386702(+)


>ENSCJAG00000010743
ATGGGAAAAAGACGTTGTGTTCCTCCACTCGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGCCCAAATTATC
TGGAAGTGGAACACACAGTCACGGGAATCAGTCCACAACTGTCCCCGGCTCTAGTTCAGGACCTCTTCAAAACCACCAGC
ATGTGGACAGCAGCAGTGGACGGGAGAATGTGTCAGACTTAACTCTGGGACCTGGAAACTCTCCCATTACACGAATGAAT
CCCGCATTGGGAGCACTGAGCCCTCTTCCCCGGCCTAATGGAACTGCCAACACCACTAAGAATCTGGTGGTGACTGCAGA
GATGTGCTGCTACTGCTTTGACGTCCTCTACTGTCACCTCTATGGCTTCCCACAGCCACGGCTCCCCAGATTCACCAACG
ACCCCTATCCGCTCTTTGTGACATGGAAGACAGGGCGGGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATG
AATCTTCATTCAGGACTCAGGGAATACACGTTAACCAGTGCACTTAAGGACAGCCGATTTCCCCCCTTGACCCGAGAGGA
GCTGCCTAAACTTTTCTGCTCTGTCTCCCTCCTTACTAACTTTGAGGATGCCAGTGATTACCTGGACTGGGAGGTAGGGG
TCCATGGGATTCGAATTGAATTCATTAATGAAAAAGGTGTCAAACGCACAGCCACTTATTTACCTGAGGTTGCTAAGGAA
CAAGACTGGGATCAGATCCAGACAATAGACTCCTTGCTCAGGAAAGGTGGCTTTAAAGCTCCAATTACCAGTGAATTCAG
AAAAACGATCAAACTCACCAGGTACCGAAGTGAGAAGGTGACAATCAGTTACGCAGAGTATATTGCTTCCCGACAGCACT
GTTTCCAGAACGGCACTCTTCATGCCCCACCCCTCTACAATCATTACTCCTGA

Library Parental gene expression (RPM)
SRP051959_colon 22 .83 RPM
SRP051959_heart 14 .98 RPM
SRP051959_kidney 25 .85 RPM
SRP051959_liver 15 .64 RPM
SRP051959_lung 25 .54 RPM
SRP051959_lymph_node 26 .60 RPM
SRP051959_skeletal_muscle 14 .74 RPM
SRP051959_spleen 25 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009373 ortholog_one2one 1 retrogene
retro_chof_1566,
Equus caballus ENSECAG00000023095 ortholog_one2one 1 retrogene
retro_ecab_1085,
Echinops telfairi ENSETEG00000000510 ortholog_one2many 1 retrogene
retro_etel_9,
Homo sapiens ENSG00000144233 ortholog_one2one 1 retrogene
retro_hsap_1227,
Gorilla gorilla ENSGGOG00000014448 ortholog_one2one 1 retrogene
retro_ggor_961,
Myotis lucifugus ENSMLUG00000006871 ortholog_one2one 1 retrogene
retro_mluc_684,
Macaca mulatta ENSMMUG00000001987 ortholog_one2one 1 retrogene
retro_mmul_1302,
Mus musculus ENSMUSG00000041915 ortholog_one2one 2 retrogenes
retro_mmus_1330, retro_mmus_352,
Nomascus leucogenys ENSNLEG00000015793 ortholog_one2one 1 retrogene
retro_nleu_700,
Pan troglodytes ENSPTRG00000012437 ortholog_one2one 1 retrogene
retro_ptro_843,
Sarcophilus harrisii ENSSHAG00000014762 ortholog_one2many 1 retrogene
retro_shar_86,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_383 73.13 63.87
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Download FASTA sequences of all ENSCJAG00000010743 retrocopies