Parental gene:

HINT2, ENSCJAG00000010068

Aliases:None
Description:histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:18344]
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:137590495..137592883(-)


>ENSCJAG00000010068
ATGGCCGCAGCCGTGGTGCTGGCCTCCGGGTTGCACGCGGCACGCAGAGCCGTGGCGGCCGCGAGAGTACGCGGGGCGCA
GGTCCGAGGAGCTGCAGGTGTGACTGATGGGAATGAAGTGACCAAGGCCCAGCAGGCAACTCCTGGGGGAGCAGCCCCAA
CCATCTTCTCCCGGATCCTGGACAGGAGCCTCCCAGCTGACATTCTCTATGAGGATCAGCAGTGTCTTGTGTTCCGTGAT
GTGGCCCCTCAGGCTCCTGTGCATTTCCTGGTCATTCCCAAGAAGCCCATTCCTCGGATTAGCCAGGCTGAAGAAGAAGA
CCAGCAGCTTCTAGGACACCTACTCATTGTGGCCAAGAAGATAGCAAAGGCTGAGGGCCTGGGAGATGGATACCGACTTG
TGATCAACGATGGGAAGCTGGGTGCACAATCTGTGTATCACCTGCATATTCATGTACTTGGGGGCCGGCAGCTCCAGTGG
CCTCCAGGTTGA

Library Parental gene expression (RPM)
SRP051959_colon 4 .66 RPM
SRP051959_heart 5 .49 RPM
SRP051959_kidney 8 .70 RPM
SRP051959_liver 7 .28 RPM
SRP051959_lung 2 .44 RPM
SRP051959_lymph_node 2 .37 RPM
SRP051959_skeletal_muscle 9 .46 RPM
SRP051959_spleen 2 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011444 ortholog_one2one 1 retrogene
retro_btau_1129,
Callithrix jacchus ENSCJAG00000014398 within_species_paralog 3 retrogenes
retro_cjac_134, retro_cjac_142, retro_cjac_87,
Cavia porcellus ENSCPOG00000000419 ortholog_one2one 1 retrogene
retro_cpor_181,
Dasypus novemcinctus ENSDNOG00000009083 ortholog_one2one 2 retrogenes
retro_dnov_201, retro_dnov_854,
Echinops telfairi ENSETEG00000017929 ortholog_one2one 1 retrogene
retro_etel_486,
Homo sapiens ENSG00000137133 ortholog_one2one 1 retrogene
retro_hsap_2603,
Gorilla gorilla ENSGGOG00000011265 ortholog_one2one 1 retrogene
retro_ggor_1823,
Loxodonta africana ENSLAFG00000015022 ortholog_one2one 1 retrogene
retro_lafr_737,
Macaca mulatta ENSMMUG00000016337 ortholog_one2one 1 retrogene
retro_mmul_1509,
Nomascus leucogenys ENSNLEG00000026914 ortholog_one2one 1 retrogene
retro_nleu_1534,
Oryctolagus cuniculus ENSOCUG00000027206 ortholog_one2many 1 retrogene
retro_ocun_66,
Otolemur garnettii ENSOGAG00000011830 ortholog_one2one 1 retrogene
retro_ogar_765,
Pongo abelii ENSPPYG00000019082 ortholog_one2one 1 retrogene
retro_pabe_2310,
Pan troglodytes ENSPTRG00000020923 ortholog_one2one 1 retrogene
retro_ptro_1754,
Pteropus vampyrus ENSPVAG00000003028 ortholog_one2one 1 retrogene
retro_pvam_842,
Tupaia belangeri ENSTBEG00000013020 ortholog_one2one 1 retrogene
retro_tbel_4676,
Tarsius syrichta ENSTSYG00000002700 ortholog_one2one 7 retrogenes
retro_tsyr_1210, retro_tsyr_1356, retro_tsyr_1483, retro_tsyr_1485, retro_tsyr_311, retro_tsyr_468, retro_tsyr_48,
Tursiops truncatus ENSTTRG00000011932 ortholog_one2one 1 retrogene
retro_ttru_1302,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1343 63.58 92.02
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Download FASTA sequences of all ENSCJAG00000010068 retrocopies