Parental gene:

PSMD4, ENSCJAG00000007357

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:18:5229954..5240245(+)


>ENSCJAG00000007357
ATGGTGTTGGAAAGCACTATGGTGTGTGTGGACAACAGTGAGTATATGCGGAATGGGGACTTCTTACCCACCCGGCTCCA
GGCCCAGCAGGATGCTGTCAACATAGTTTGTCATTCAAAGACCCGCAGCAACCCGGAGAACAACGTGGGCCTTATCACAC
TGGCTAATGACTGTGAAGTGCTGACCACACTCACCCCAGACACTGGCCGTATCCTGTCCAAGCTACACACTGTCCAACCC
AAGGGCAAGATCACCTTCTGCACTGGCATCCGCGTGGCCCATCTGGCTCTGAAGCACCGTCAGGGCAAGAATCACAAGAT
GCGCATCATTGCCTTTGTGGGAAGCCCAGTGGAGGACAATGAGAAGGATCTGGTGAAACTGGCTAAACGCCTCAAGAAGG
AGAAAGTAAATGTTGACATTATCAATTTTGGGGAAGAGGAGGTGAACACAGAAAAGCTGACAGCCTTTGTAAACACGCTG
AATGGCAAAGATGGAACTGGTTCTCATCTGGTGACAGTACCTCCTGGGCCCAGCTTGGCTGATGCTCTCATCAGTTCTCC
GATTTTGGCTGGTGAAGGTGGTGCCATGCTGGGTCTCGGTGCCAGTGACTTTGAATTTGGAGTAGATCCCAGTGCGGATC
CCGAGCTGGCCTTGGCCCTTCGTGTATCTATGGAAGAGCAGCGGCAGCGGCAAGAGGAGGAGGCCCGGCGGGCAGCTGCA
GCTTCTGCTGCTGAGGCCGGGATTGCTACGACTGGGACTGAAGGTGAAAGAGACTCAGACGATGCCCTGCTGAAGATGAC
CATCAGCCAGCAAGAGTTTGGCCGCACTGGGCTTCCTGACCTAAGCAGTATGACTGAGGAAGAGCAGATTGCTTATGCCA
TGCAGATGTCCCTGCAGGGAGCAGAGTTTGGTCAGGCGGAATCAGCAGACATTGATGCCAGCTCAGCCATGGACACATCT
GAGCCAGCCAAGGAGGAGGATGATTACGATGTGATGCAGGACCCCGAGTTCCTTCAGAGTGTTCTAGAGAACCTCCCAGG
TGTGGATCCCAACAATGAAGCCATTCGAAATGCAATGGGCTCCCTGGCCTCCCAGGCCACCAAGGACGGCAAGAAGGACA
AGAAAGAGGAAGACAAGAAGTGA

Library Parental gene expression (RPM)
SRP051959_colon 17 .31 RPM
SRP051959_heart 28 .61 RPM
SRP051959_kidney 29 .26 RPM
SRP051959_liver 33 .36 RPM
SRP051959_lung 23 .67 RPM
SRP051959_lymph_node 21 .48 RPM
SRP051959_skeletal_muscle 76 .41 RPM
SRP051959_spleen 24 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012565 ortholog_one2one 1 retrogene
retro_cfam_591,
Dasypus novemcinctus ENSDNOG00000007446 ortholog_one2one 1 retrogene
retro_dnov_1556,
Homo sapiens ENSG00000159352 ortholog_one2one 1 retrogene
retro_hsap_2531,
Nomascus leucogenys ENSNLEG00000010139 ortholog_one2one 1 retrogene
retro_nleu_1450,
Pongo abelii ENSPPYG00000000871 ortholog_one2one 1 retrogene
retro_pabe_1862,
Pan troglodytes ENSPTRG00000013893 ortholog_one2one 1 retrogene
retro_ptro_1474,
Sus scrofa ENSSSCG00000006628 ortholog_one2one 1 retrogene
retro_sscr_981,
Tupaia belangeri ENSTBEG00000016911 ortholog_one2one 1 retrogene
retro_tbel_238,
Tursiops truncatus ENSTTRG00000007019 ortholog_one2one 1 retrogene
retro_ttru_903,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2808 84.49 64.47
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000007357 retrocopies