Parental gene:

DNAJA1, ENSCHOG00000000631

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily A, member 1 [Source:HGNC Symbol;Acc:5229]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_977:7136..16729(+)


>ENSCHOG00000000631
ATGGTGAAAGAAACCACTTACTATGATGTTTTGGGGGTCAAACCCAATGCCACCCAGGAAGAGTTGAAAAAGGCTTACAG
GAAACTAGCCTTGAAATACCACCCTGACAAGAATCCAAACGAAGGAGAGAAGTTTAAACAGATTTCTCAAGCTTATGAAG
TGCTCTCTGATGCAAAGAAAAGAGAATTATATGACAAAGGAGGAGAACAGGCCATCAAAGAGGGTGGAGCAGGTGGGGGT
TTTGGCTCCCCCATGGACATCTTTGATATGTTTTTTGGAGGTGGTGGAAGGATGCAGAGAGAAAGGAGAGGTAAAAATGT
TGTACATCAGCTCTCAGTAACCTTAGAAGATTTATATAATGGTGCAACAAGAAAACTCGCTCTGCAAAAGAATGTGATTT
GCGACAAATGTGAAGGCCGAGGTGGTAAGAAAGGAGCAGTTGAGTGCTGTCCCAATTGCAGAGGTACTGGAATGCAAATA
AGAATTCATCAGATAGGACCTGGAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAAGGCCATGGGGAACGGAT
CAGTCCTAAAGATAGATGTAAAAGTTGCAATGGAAGGAAGATAGTTCGAGAGAAGAAGATTCTAGAAGTTCATATTGACA
AAGGCATGAAAGATGGCCAAAAGATAACATTCCATGGTGAAGGAGACCAAGAGCCAGGACTGGAGCCAGGAGATATTATC
ATTGTTTTAGATCAGAAGGATCATGCTGTTTTTAGTCGGCGAGGAGAGGACCTTTTCATGTGTATGGACATACAGCTGGT
TGAAGCATTGTGTGGCTTCCAAAAGCCAATATCCACTCTTGACAACCGAACCATAGTTATCACCTCTCATCCAGGTCAGA
TTGTCAAACATGGAGACATCAAGTGTGTGCTAAATGAAGGCATGCCAATTTATCGTAGGCCATATGAAAAGGGTCGCCTA
ATCATCGAATTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTACC
TGAGAAGAAAGAAGTAGAAGAAATTGATGAAATGGATCAGGTAGAAATGGTGGACTATGATCCCAATCAGGAAAGACAGC
ACCATTGCAATGGAGAAGCATATGAGGATGATGGCCACCACCCCAGAGGTGGTGTGCAGCAGCAAGCCTCT

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001818 possible_ortholog 23 retrogenes
retro_cfam_1111, retro_cfam_1153, retro_cfam_1218, retro_cfam_1229, retro_cfam_1315, retro_cfam_1352, retro_cfam_1420, retro_cfam_1457, retro_cfam_1520, retro_cfam_1668, retro_cfam_1833, retro_cfam_1941, retro_cfam_1949, retro_cfam_1994, retro_cfam_2004, retro_cfam_2162, retro_cfam_352, retro_cfam_391, retro_cfam_419, retro_cfam_749, retro_cfam_751, retro_cfam_923, retro_cfam_993,
Callithrix jacchus ENSCJAG00000008022 possible_ortholog 10 retrogenes
retro_cjac_1645, retro_cjac_1777, retro_cjac_2015, retro_cjac_2120, retro_cjac_2730, retro_cjac_2731, retro_cjac_2763, retro_cjac_3037, retro_cjac_3762, retro_cjac_887,
Cavia porcellus ENSCPOG00000000462 possible_ortholog 6 retrogenes
retro_cpor_1456, retro_cpor_225, retro_cpor_386, retro_cpor_396, retro_cpor_561, retro_cpor_781,
Felis catus ENSFCAG00000008729 possible_ortholog 5 retrogenes
retro_fcat_1241, retro_fcat_1407, retro_fcat_1502, retro_fcat_1984, retro_fcat_811,
Gorilla gorilla ENSGGOG00000007030 ortholog_one2one 3 retrogenes
retro_ggor_1603, retro_ggor_2463, retro_ggor_418,
Myotis lucifugus ENSMLUG00000016086 possible_ortholog 7 retrogenes
retro_mluc_1245, retro_mluc_1485, retro_mluc_1737, retro_mluc_1878, retro_mluc_2062, retro_mluc_2579, retro_mluc_576,
Monodelphis domestica ENSMODG00000003384 ortholog_one2one 7 retrogenes
retro_mdom_1140, retro_mdom_1253, retro_mdom_1451, retro_mdom_1627, retro_mdom_1824, retro_mdom_742, retro_mdom_874,
Mustela putorius furo ENSMPUG00000004231 possible_ortholog 2 retrogenes
retro_mputfur_1543, retro_mputfur_487,
Nomascus leucogenys ENSNLEG00000005268 possible_ortholog 4 retrogenes
retro_nleu_1255, retro_nleu_2550, retro_nleu_2793, retro_nleu_509,
Oryctolagus cuniculus ENSOCUG00000004833 possible_ortholog 2 retrogenes
retro_ocun_516, retro_ocun_70,
Rattus norvegicus ENSRNOG00000007029 possible_ortholog 2 retrogenes
retro_rnor_2208, retro_rnor_608,
Sarcophilus harrisii ENSSHAG00000012366 ortholog_one2one 1 retrogene
retro_shar_762,
Ictidomys tridecemlineatus ENSSTOG00000005200 possible_ortholog 4 retrogenes
retro_itri_265, retro_itri_303, retro_itri_378, retro_itri_809,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_186 84.13 62.47
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2. retro_chof_287 88.14 59.19
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3. retro_chof_417 79.00 70.53
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4. retro_chof_498 78.27 83.88
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5. retro_chof_946 90.00 100.00
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6. retro_chof_1760 79.23 51.89
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7. retro_chof_2020 78.95 51.64
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8. retro_chof_2541 81.28 50.38
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9. retro_chof_2694 91.18 100.00
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Download FASTA sequences of all ENSCHOG00000000631 retrocopies