Parental gene:

SDHB, ENSCAFG00000015832

Aliases:None
Description:Canis lupus familiaris succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (SDHB), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001252217]
Organism:Dog (Canis familiaris)
Coordinates:2:81158290..81190114(+)


>ENSCAFG00000015832
ATGGCGGCGGTGGTCGGAGTCTCCTTGAAACGCCGGTTCCCGGCTGCAGCCCTCGGCGGAGCCTGCCTGCAGGCCTGCCG
GGGGGCACAGACAGCGGCAGCCACAGCTCCCCGAATCAAGAAATTTGCCATCTACCGATGGGACCCAGACAAGACTGGAG
ATAAACCGCATATGCAGACTTATGAAATTGATTTGAATAAATGTGGTCCTATGGTGTTGGATGCTTTAATCAAGATTAAG
AATGAAATTGACTCTACCTTGACCTTCCGAAGATCATGCAGAGAAGGCATCTGTGGCTCCTGTGCCATGAACATCAACGG
AGGCAACACTCTGGCTTGCACCCGCCGGATCGACACCAACCTCAGCAAAGTCTCCAAAATCTACCCTCTGCCGCATATGT
ATGTGATAAAGGATCTGGTTCCTGACTTGAGCAACTTCTATGCTCAGTATAAATCCATTGAACCTTATTTGAAGAAGAAG
GATGAATCCCAAGAGGGCAAGCAGCAGTATCTGCAGTCCATAGAAGATCGTGAGAAACTGGACGGGCTGTACGAGTGTAT
CCTCTGTGCTTGCTGCAGCACCAGCTGCCCTAGCTACTGGTGGAATGGAGACAAATACCTGGGGCCTGCGGTTCTCATGC
AGGCCTACCGCTGGATGATCGACTCCAGAGACGACTTCACTGAGGAGCGCCTGGCCAAGCTGCAGGACCCGTTCTCTCTG
TACCGCTGCCACACCATCATGAACTGCACAAGGACCTGCCCCAAGGGGCTGAATCCAGGCAAAGCTATTGCTGAAATCAA
GAAAATGATGGCCACCTATAAGGGGAAGAAAGCGTCCGTGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 22 .55 RPM
SRP017611_brain 14 .21 RPM
SRP017611_kidney 89 .35 RPM
SRP017611_liver 58 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005664 ortholog_one2one 1 retrogene
retro_chof_2016,
Callithrix jacchus ENSCJAG00000007927 ortholog_one2one 1 retrogene
retro_cjac_2988,
Loxodonta africana ENSLAFG00000018475 ortholog_one2one 1 retrogene
retro_lafr_454,
Macropus eugenii ENSMEUG00000004817 ortholog_one2one 1 retrogene
retro_meug_1106,
Microcebus murinus ENSMICG00000016629 ortholog_one2one 1 retrogene
retro_mmur_1062,
Myotis lucifugus ENSMLUG00000000032 possible_ortholog 1 retrogene
retro_mluc_150,
Nomascus leucogenys ENSNLEG00000013264 ortholog_one2one 1 retrogene
retro_nleu_1640,
Sorex araneus ENSSARG00000013780 ortholog_one2one 1 retrogene
retro_sara_577,
Tupaia belangeri ENSTBEG00000004803 ortholog_one2one 2 retrogenes
retro_tbel_2480, retro_tbel_2875,
Xenopus tropicalis ENSXETG00000013435 ortholog_one2one 1 retrogene
retro_xtro_60,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_587 98.93 100.00
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Download FASTA sequences of all ENSCAFG00000015832 retrocopies