Parental gene:

FIS1, ENSCAFG00000013800

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:6:8642127..8645604(+)


>ENSCAFG00000013800
ATGGAGGCCGTACTGAACGAGCTGGTGTCTGTGGACGACCTGCTGAAGTTTGAAAAGAAATTTCAATCTGAGAAGGCAGC
AGGCTCCGTGTCCAAGAGCACGCAGTTTGAGTATGCCTGGTGCCTGGTGCGCAGCAAGTACAACGACGACATCCGTAAAG
GCATCGCATTGCTGGAGGAACTGCTGCCCAAGGGGAGTAAAGAGGAGCAGCGGGATTATGTCTTCTACCTGGCTGTGGGG
AATTACCGGCTCAAGGAATATGAGAAGGCACTAAAGTATGTGCGGGGGCTGCTACAGACAGAGCCCCAGAACAACCAGGC
CAAGGAACTGGAACGGCTCATTGACAAGGCCATGAAGAAAGATGGACTAGTGGGCATGGCCATTGTCGGAGGCATGGCCC
TGGGCGTGGCGGGCCTGGCTGGACTCATCGGACTTGCTGTATCCAAGTCCAAATCCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 64 .72 RPM
SRP017611_brain 49 .78 RPM
SRP017611_kidney 150 .76 RPM
SRP017611_liver 39 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016053 ortholog_one2one 1 retrogene
retro_cjac_1913,
Loxodonta africana ENSLAFG00000020494 ortholog_one2one 1 retrogene
retro_lafr_702,
Myotis lucifugus ENSMLUG00000024207 ortholog_one2many 1 retrogene
retro_mluc_168,
Monodelphis domestica ENSMODG00000005034 ortholog_one2one 1 retrogene
retro_mdom_1773,
Otolemur garnettii ENSOGAG00000028158 ortholog_one2one 1 retrogene
retro_ogar_1544,
Rattus norvegicus ENSRNOG00000001420 ortholog_one2one 2 retrogenes
retro_rnor_1659, retro_rnor_1689,
Sus scrofa ENSSSCG00000027757 ortholog_one2one 1 retrogene
retro_sscr_1083,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_557 56.63 53.95
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2. retro_cfam_755 79.87 100.00
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Download FASTA sequences of all ENSCAFG00000013800 retrocopies