Parental gene:

TMBIM6, ENSCAFG00000008400

Aliases:None
Description:Canis lupus familiaris transmembrane BAX inhibitor motif containing 6 (TMBIM6), mRNA. [Source:RefSeq mRNA;Acc:NM_001252399]
Organism:Dog (Canis familiaris)
Coordinates:27:4921605..4944783(-)


>ENSCAFG00000008400
ATGAACATATTTGATCGGAAGATCAACTTTGATGCACTCTTAAAATTTTCCCACATAACCCCCTCTACACAGCAGCACCT
GAAGAAGGTCTATGCCAGTTTTGCTCTCTGTATGTTCGTGGCAGCTGCAGGGGCCTATGTCCATGTGGTCACTCATTTCC
TTCAGGCTGGCCTGCTCTCTGCCTTGGGCTCCCTGGGGTTGATGATTTGGCTGATGGCAACACCTCATAGCCATGAAACT
GAGCAAAAAAGACTGGGACTTCTTGCTGGATTTGCTTTCCTTACAGGAGTTGGCCTGGGCCCTGCTCTGGAGCTGTGCAT
TGCCATCAACCCCAGCATTCTTCCCACTGCCTTCATGGGCACAGCAATGATCTTTACCTGCTTCACCCTGAGTGCCCTCT
ATGCCAGGCGCCGGAGCTACCTCTTTCTGGGAGGTGTCTTGATGTCAGCCATGAGTCTGATGCTCTTATCTTCCCTGGGG
AACCTTTTCTTTGGATCCATTTGGCTTTTCCAGGCAAACCTGTATGTGGGGCTGGTGGTCATGTGTGGCTTTGTCCTTTT
TGATACTCAACTCATTATTGAAAAGGCTGAAAATGGAGATAAGGATTATATCTGGCACTGCGTTGACCTCTTCTTAGATT
TCGTTACCCTCTTCAGAAAACTCATGATGATCCTGGCTATGAATGAGAAGGACAAGAAGAAAGAGAAGAAGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 264 .55 RPM
SRP017611_brain 250 .01 RPM
SRP017611_kidney 1552 .60 RPM
SRP017611_liver 706 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000018588 ortholog_one2one 1 retrogene
retro_btau_762,
Callithrix jacchus ENSCJAG00000021032 ortholog_one2many 1 retrogene
retro_cjac_272,
Dasypus novemcinctus ENSDNOG00000007882 ortholog_one2one 2 retrogenes
retro_dnov_164, retro_dnov_857,
Macropus eugenii ENSMEUG00000015590 ortholog_one2many 4 retrogenes
retro_meug_1076, retro_meug_1706, retro_meug_2157, retro_meug_48,
Monodelphis domestica ENSMODG00000004277 ortholog_one2many 2 retrogenes
retro_mdom_210, retro_mdom_250,
Otolemur garnettii ENSOGAG00000005137 ortholog_one2one 2 retrogenes
retro_ogar_1074, retro_ogar_3470,
Pteropus vampyrus ENSPVAG00000016821 ortholog_one2one 1 retrogene
retro_pvam_755,
Sarcophilus harrisii ENSSHAG00000010366 ortholog_one2many 1 retrogene
retro_shar_622,
Ictidomys tridecemlineatus ENSSTOG00000001165 ortholog_one2one 2 retrogenes
retro_itri_1273, retro_itri_564,
Tarsius syrichta ENSTSYG00000002427 ortholog_one2one 1 retrogene
retro_tsyr_916,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_876 100.00 100.00
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2. retro_cfam_1220 90.34 100.00
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Download FASTA sequences of all ENSCAFG00000008400 retrocopies