Parental gene:

ENSCAFG00000005777

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:21:25944459..25947503(-)


>ENSCAFG00000005777
ATGGCCCAGCTGGTGACAACGCAGGTGCTGTTCCTTCTGGTGGGGGTGGCCGCAGTATGGACAGCGCGGCCCAGAACTGA
GCTTCTCAATGTCTGTATGGACGCCAAGCACCACAAGGAAAAGCCAAGCCCGGAGGACGGGCTGCATAAGCAGTGCAGCC
CCTGGAAGAAGAATTCCTGCTGCTTTGCCAACACCAGCCGGGAAGCCCATAAGGATATTTCCTACCTGTACAGATTTAAC
TGGAACCATTGCGGATCTATGACACCTGCCTGCAAAAAGCACTTCATCCAGGACACCTGCCTATATGAGTGTTCCCCCAA
CCTGGGGCCCTGGATTCAGGAGGTAAATCAGAGCTGGCGCAAGGAGCGCATCCTGCATGTGCCCCTGTGCAAAGAGGATT
GTGAGCAATGGTGGCAGGACTGCCGCACCTCCTACACCTGCAAGAGCAACTGGCACAAGGGCTGGAACTGGACCTCAGGG
TATAACCAGTGTCCAGAGGGAGCTGCCTGCCACCCCTTCCATTTCTACTTCCCCACATCTGCTGCTCTGTGCAGTGAAAT
CTGGAGTCACTCCTACAAAGTCAGCAACTACAGCCGAGGGAGCGGCCGCTGCATCCAGATGTGGTTTGACCCGGCCCAGG
GCAACCCCAACGAGGAGGTGGCGAGGTTCTATGCCAGGGCCATGAGTGAGGCTACGCACTGTGTCCTTGGGCCTCCCTTG
CTCAGCCTGGCCCTGATGCTGCTCTGGCTACTTAGCTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 0 .00 RPM
SRP017611_brain 0 .32 RPM
SRP017611_kidney 219 .71 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015224 ortholog_one2many 1 retrogene
retro_cjac_3330,
Dasypus novemcinctus ENSDNOG00000000856 ortholog_one2many 1 retrogene
retro_dnov_1751,
Echinops telfairi ENSETEG00000015365 ortholog_many2many 2 retrogenes
retro_etel_1160, retro_etel_128,
Myotis lucifugus ENSMLUG00000014126 ortholog_one2many 2 retrogenes
retro_mluc_1199, retro_mluc_567,
Monodelphis domestica ENSMODG00000008017 ortholog_many2many 1 retrogene
retro_mdom_990,
Monodelphis domestica ENSMODG00000008032 ortholog_many2many 1 retrogene
retro_mdom_588,
Monodelphis domestica ENSMODG00000008042 ortholog_many2many 1 retrogene
retro_mdom_648,
Mus musculus ENSMUSG00000001827 ortholog_one2many 1 retrogene
retro_mmus_1438,
Oryctolagus cuniculus ENSOCUG00000000165 ortholog_one2many 1 retrogene
retro_ocun_472,
Otolemur garnettii ENSOGAG00000000641 ortholog_one2many 5 retrogenes
retro_ogar_2539, retro_ogar_2666, retro_ogar_2758, retro_ogar_2908, retro_ogar_532,
Tarsius syrichta ENSTSYG00000003503 ortholog_one2many 3 retrogenes
retro_tsyr_1057, retro_tsyr_111, retro_tsyr_1651,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1723 78.97 100.00
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Download FASTA sequences of all ENSCAFG00000005777 retrocopies