Parental gene:

SC5DL, ENSBTAG00000019246

Aliases:None
Description:lathosterol oxidase [Source:RefSeq peptide;Acc:NP_001030433]
Organism:Cow (Bos taurus)
Coordinates:15:32412563..32424510(+)


>ENSBTAG00000019246
ATGGATCTTGTACTCAGTATTGCAGATTATTATTTTTTTACACCGTACATATATCCAGCCACATGGCCAGAGGACAACAT
CTTCCGACAAGCTATCACTCTCCTGATTGTAACAAATCTCGGTGCTTTTATACTGTATTTCTTCTTTGCAACACTGAGTT
ATTATTTTGTCTATGATCATTTATTAATGAAACACCCACAATTTTTAAAGAATCAAGTCTCTCGAGAGATTACGCATTCT
GTCCAGTCAATGCCATGGATGAGCATCCCCACGGTTTTACTGTTCCTGCTAGAGGTGAGAGGTTACAGCAGACTCTATGA
CGGCATAGGAGAGTTTCCATATGGCTGGTTTCAACTCGTTGCTAGTGTCTTGTCTTTTCTTTTCTTCACTGACATGCTGA
TCTACTGGATTCACAGAGGCCTTCATCATAAACTTGTATATAAGCGCTTACACAAACCTCATCACATCTGGAAGATCCCA
ACTCCATTTGCGAGTCACGCTTTTCATCCTCTGGACGGCTTCCTTCAGAGTCTGCCTTACCACATATATCCTTTCATCTT
CCCGTTACACAAGACATCCTGGGCTTGA

Library Parental gene expression (RPM)
ERP005899_liver 1244 .52 RPM
ERP005899_muscle 38 .38 RPM
SRP017611_brain 57 .78 RPM
SRP017611_kidney 65 .61 RPM
SRP017611_liver 239 .14 RPM
SRP030211_testis 7 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011805 ortholog_one2one 1 retrogene
retro_cfam_291,
Callithrix jacchus ENSCJAG00000007436 ortholog_one2one 1 retrogene
retro_cjac_1911,
Monodelphis domestica ENSMODG00000013028 ortholog_one2one 1 retrogene
retro_mdom_1086,
Mustela putorius furo ENSMPUG00000005754 ortholog_one2one 1 retrogene
retro_mputfur_484,
Ochotona princeps ENSOPRG00000003219 ortholog_one2one 1 retrogene
retro_opri_1143,
Ictidomys tridecemlineatus ENSSTOG00000008946 ortholog_one2one 1 retrogene
retro_itri_964,
Tupaia belangeri ENSTBEG00000000490 ortholog_one2one 1 retrogene
retro_tbel_4326,
Tarsius syrichta ENSTSYG00000011139 ortholog_one2one 1 retrogene
retro_tsyr_1097,
Tursiops truncatus ENSTTRG00000006908 ortholog_one2one 1 retrogene
retro_ttru_777,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_813 58.90 74.36
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Download FASTA sequences of all ENSBTAG00000019246 retrocopies